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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005834000
- symbol?: —
- synonym:
- description?: sodium ABC transporter permease
- sodium ABC transporter permease
- ABC transporter permease
- ABC-type Na efflux pump, permease component, putative
- ABC-2 transporter family protein
- ABC superfamily ATP binding cassette transporter, membrane protein
- ABC transporter ATP-binding protein
- ABC-type Na+ efflux pump, permease component
- ABC-type Na+ efflux pump permease component
- Na+ efflux pump ABC transporter permease
- Na+ efflux pump permease-like protein
- Sodium export permease protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5914703..5915935
- synteny block?: BlockID0045790
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2279
08BA02176:
C248_2383
11819-97:
MS7_2359
6850:
RSAU_002175
71193:
ST398NM01_2393
ECT-R 2:
ECTR2_2201
ED133:
SAOV_2382c
ED98:
SAAV_2405
HO 5096 0412:
SAEMRSA15_22370
JH1:
SaurJH1_2410
JH9:
SaurJH9_2365
JKD6008:
SAA6008_02378
JKD6159:
SAA6159_02244
LGA251:
SARLGA251_21230
M013:
M013TW_2298
MRSA252:
SAR2426
MSHR1132:
SAMSHR1132_21650
MSSA476:
SAS2232
Mu3:
SAHV_2324
Mu50:
SAV2340
MW2:
MW2260
RF122:
SAB2218c
ST398:
SAPIG2393
T0131:
SAT0131_02527
TCH60:
HMPREF0772_10853
TW20:
SATW20_24720
USA300_TCH1516:
USA300HOU_2322
VC40:
SAVC_10565
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MHKFWATFTLTYIKKIKAKSFVIFMIIIAALMIGLSNIDKIINMFDDGPDKIGVAAPNEQ
N315 MHKFWATFTLTYIKKIKAKSFVIFMIIIAALMIGLSNIDKIINMFDDGPDKIGVAAPNEQ
NCTC8325 MHKFWATFTLTYIKKIKAKSFVIFMIIIAALMIGLSNIDKIINMFDDGPDKIGVAAPNEQ
Newman MHKFWATFTLTYIKKIKAKSFVIFMIIIAALMIGLSNIDKIINMFDDGPDKIGVAAPNEQ
USA300_FPR3757 MHKFWATFTLTYIKKIKAKSFVIFMIIIAALMIGLSNIDKIINMFDDGPDKIGVAAPNEQ
************************************************************
COL IYKVFKQQANTFHSDAKFTKVSIEDAEKEVKKHKLDKAYIIKVNQNRTLQGTIISEKRVS
N315 IYKVFKQQANTFHSDAKFTKVSIEDAEKEVKKHKLDKAYIIKVNQNRTLQGTIISEKRVS
NCTC8325 IYKVFKQQANTFHSDAKFTKVSIEDAEKEVKKHKLDKAYIIKVNQNRTLQGTIISEKRVS
Newman IYKVFKQQANTFHSDAKFTKVSIEDAEKEVKKHKLDKAYIIKVNQNRTLQGTIISEKRVS
USA300_FPR3757 IYKVFKQQANTFHSDAKFTKVSIEDAEKEVKKHKLDKAYIIKVNQNRTLQGTIISEKRVS
************************************************************
COL HEDSQKVQALLTAIQTNMVAGELNINKEDLQKLQAQSKVDNKVISNDEVDKVSEGQKIFN
N315 HEDSQKVQALLTAIQTNMVAGELNINKEDLQKLQAQSKVDNKVISNDEVDKVSEGQKIFN
NCTC8325 HEDSQKVQALLTAIQTNMVAGELNINKEDLQKLQAQSKVDNKVISNDEVDKVSEGQKIFN
Newman HEDSQKVQALLTAIQTNMVAGELNINKEDLQKLQAQSKVDNKVISNDEVDKVSEGQKIFN
USA300_FPR3757 HEDSQKVQALLTAIQTNMVAGELNINKEDLQKLQAQSKVDNKVISNDEVDKVSEGQKIFN
************************************************************
COL YALAYGIIFLMFFIVLNYASQIAMEIASEKTSRVIEMIITSISPIQHIFAKILGVIAVAV
N315 YALAYGIIFLMFFIVLNYASQIAMEIASEKTSRVIEMIITSISPIQHIFAKILGVIAVAV
NCTC8325 YALAYGIIFLMFFIVLNYASQIAMEIASEKTSRVIEMIITSISPIQHIFAKILGVIAVAV
Newman YALAYGIIFLMFFIVLNYASQIAMEIASEKTSRVIEMIITSISPIQHIFAKILGVIAVAV
USA300_FPR3757 YALAYGIIFLMFFIVLNYASQIAMEIASEKTSRVIEMIITSISPIQHIFAKILGVIAVAV
************************************************************
COL TQIILIVLMAVICIFAFDLKDLLQGFNVEMNQLSWQIIIVGIISSIVGITAYVLLAAILG
N315 TQIILIVLMAVICIFAFDLKDLLQGFNVEMNQLSWQIIIVGIISSIVGIMAYVLLAAILG
NCTC8325 TQIILIVLMAVICIFAFDLKDLLQGFNVEMNQLSWQIIIVGIISSIVGITAYVLLAAILG
Newman TQIILIVLMAVICIFAFDLKDLLQGFNVEMNQLSWQIIIVGIISSIVGITAYVLLAAILG
USA300_FPR3757 TQIILIVLMAVICIFAFDLKDLLQGFNVEMNQLSWQIIIVGIISSIVGITAYVLLAAILG
************************************************* **********
COL SLTSRIEDLNQSLMPLTLLGMIAFYIAIFTINNPDGQLALITSYIPFLAPFQLVVRAQTS
N315 SLTSRIEDLNQSLMPLTLLGMIAFYIAIFTINNPDGQLALITSYIPFLAPFQLVVRAQTS
NCTC8325 SLTSRIEDLNQSLMPLTLLGMIAFYIAIFTINNPDGQLALITSYIPFLAPFQLVVRAQTS
Newman SLTSRIEDLNQSLMPLTLLGMIAFYIAIFTINNPDGQLALITSYIPFLAPFQLVVRAQTS
USA300_FPR3757 SLTSRIEDLNQSLMPLTLLGMIAFYIAIFTINNPDGQLALITSYIPFLAPFQLVVRAQTS
************************************************************
COL GLQIYEVILSSLISIVMVAVLIWIAIKTYKDSVLTFERGLFNSMKRVFKK
N315 GLQIYEVILSSLISIVMVAVLIWIAIKTYKDSVLTFERGLFNSMKRVFKK
NCTC8325 GLQIYEVILSSLISIVMVAVLIWIAIKTYKDSVLTFERGLFNSMKRVFKK
Newman GLQIYEVILSSLISIVMVAVLIWIAIKTYKDSVLTFERGLFNSMKRVFKK
USA300_FPR3757 GLQIYEVILSSLISIVMVAVLIWIAIKTYKDSVLTFERGLFNSMKRVFKK
**************************************************