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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005850000
- symbol?: —
- synonym:
- description?: membrane protein
- strand?: +
- coordinates?: 5926547..5927194
- synteny block?: BlockID0045950
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2290
08BA02176:
C248_2394
11819-97:
MS7_2369
6850:
RSAU_002185
71193:
ST398NM01_2403
ECT-R 2:
ECTR2_2211
ED133:
SAOV_2394
ED98:
SAAV_2415
HO 5096 0412:
SAEMRSA15_22490
JH1:
SaurJH1_2421
JH9:
SaurJH9_2375
JKD6008:
SAA6008_02388
JKD6159:
SAA6159_02255
LGA251:
SARLGA251_21330
M013:
M013TW_2308
MRSA252:
SAR2436
MSHR1132:
SAMSHR1132_21750
MSSA476:
SAS2242
Mu3:
SAHV_2335
Mu50:
SAV2351
MW2:
MW2272
RF122:
SAB2230
ST398:
SAPIG2403
T0131:
SAT0131_02537
TCH60:
HMPREF0772_10843
TW20:
SATW20_24820
USA300_TCH1516:
USA300HOU_2332
VC40:
SAVC_10615
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNPNQRLEPFDETFQQPNIHRGKRYGKKKRSLVSMIIQIIVVILTAIAGYSMWKQPIFN
N315 MTNPNQRLEPFDETFQQPNIHRGKRYGKKKRSLVSMIIQIIVVILTAIAGYSMWKQPIFN
NCTC8325 MTNPNQRLEPFDETFQQPNIHRGKRYGKKKRSLVSMIIQIIVVILTTIAGYSMWKQPIFN
Newman MTNPNQRLEPFDETFQQPNIHRGKRYGKKKRSLVSMIIQIIVVILTAIAGYSMWKQPIFN
USA300_FPR3757 MTNPNQRLEPFDETFQQPNIHRGKRYGKKKRSLVSMIIQIIVVILTAIAGYSMWKQPIFN
**********************************************:*************
COL IVFTKESVDFDGIKNFNETIGKMHQLNINLGNINDLQQGIDRLILVFNGFFILCIVSLVI
N315 IVFTKESVDFDGIKNFNETIGKMHQLNINLGNINDLQQGIDRLILVFNGFFILCIVSLVI
NCTC8325 IVFTKESVDFDGIKNFNETIGKMHQLNINLGNINDLQQGIDRLILVFNGFFILCIVSLVI
Newman IVFTKESVDFDGIKNFNETIGKMHQLNINLGNINDLQQGIDRLILVFNGFFILCIVSLVI
USA300_FPR3757 IVFTKESVDFDGIKNFNETIGKMHQLNINLGNINDLQQGIDRLILVFNGFFILCIVSLVI
************************************************************
COL TILTIVFNRTVLKVVNILVLTIMLVITLYFSYIIKALAQEIADVFKKYYLNVPPDQVITE
N315 TILTIVFNRTVLKVVNILVLTIMLVITLYFSYIIKTLAQEIADALKKYYLNVPPDQVITE
NCTC8325 TILTIVFNRTVLKVVNILVLTIMLVITLYFSYIIKALAQEIADVFKKYYLNVPPDQVITE
Newman TILTIVFNRTVLKVVNILVLTIMLVITLYFSYIIKALAQEIADVFKKYYLNVPPDQVITE
USA300_FPR3757 TILTIVFNRTVLKVVNILVLTIMLVITLYFSYIIKALAQEIADVFKKYYLNVPPDQVITE
***********************************:*******.:***************
COL ADAIHNGIILLGCSIGLLVISLFFRNRMPRLK
N315 ADAIHNGIILLGCSIGLLVISLFFRNRMPRLK
NCTC8325 ADAIHNGIILLGCSIGLLVISLFFRNRMPRLK
Newman ADAIHNGIILLGCSIGLLVISLFFRNRMPRLK
USA300_FPR3757 ADAIHNGIILLGCSIGLLVISLFFRNRMPRLK
********************************