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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005870000
- symbol?: hssR
- synonym:
- description?: DNA-binding response regulator
- DNA-binding response regulator
- DNA-binding heme response regulator HssR
- response regulator protein
- two-component response regulator, putative
- heme response regulator HssR
- two component response regulator
- hemin DNA-binding response regulator
- response regulator receiver
- Two-component response regulator colocalized with HrtAB transporter
- two component transcriptional regulator
- winged helix family two component transcriptional regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5942373..5943074
- synteny block?: BlockID0046150
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2300
08BA02176:
C248_2406
11819-97:
MS7_2379 (hssR)
6850:
RSAU_002196
71193:
ST398NM01_2414
ECT-R 2:
ECTR2_2221
ED133:
SAOV_2405
ED98:
SAAV_2426
HO 5096 0412:
SAEMRSA15_22590
JH1:
SaurJH1_2431
JH9:
SaurJH9_2385
JKD6008:
SAA6008_02399 (hssR)
JKD6159:
SAA6159_02265 (hssR)
LGA251:
SARLGA251_21440 (hssR)
M013:
M013TW_2319
MRSA252:
SAR2447
MSHR1132:
SAMSHR1132_21860
MSSA476:
SAS2252
Mu3:
SAHV_2345
Mu50:
SAV2361
MW2:
MW2282
RF122:
SAB2240
ST398:
SAPIG2414
T0131:
SAT0131_02549 (spc)
TCH60:
HMPREF0772_10831 (regX)
TW20:
SATW20_24930 (hssR)
USA300_TCH1516:
USA300HOU_2344 (hssR)
VC40:
SAVC_10675
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVQCLVVDDDPRILNYIASHLQIEHIDAYTQPSGEAALKLLEKQRVDIAVVDIMMDGMDG
N315 MVQCLVVDDDPRILNYIASHLQTEHIDAYTQPSGEAALKLLEKQRVDIAVVDIMMDGMDG
NCTC8325 MVQCLVVDDDPRILNYIASHLQTEHIDAYTQPSGEAALKLLEKQRVDIAVVDIMMDGMDG
Newman MVQCLVVDDDPRILNYIASHLQIEHIDAYTQPSGEAALKLLEKQRVDIAVVDIMMDGMDG
USA300_FPR3757 MVQCLVVDDDPRILNYIASHLQTEHIDAYTQPSGEAALKLLEKQRVDIAVVDIMMDGMDG
********************** *************************************
COL FQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKPFEVKELIFRIRAVLRRYN
N315 FQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKPFEVKELIFRIRAVLRRYN
NCTC8325 FQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKPFEVKELIFRIRAVLRRYN
Newman FQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKPFEVKELIFRIRAVLRRYN
USA300_FPR3757 FQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKPFEVKELIFRIRAVLRRYN
************************************************************
COL INSNSEMTIGNLTLNQSYLELQVSNKTMTLPNKEFQLLFMLAARPKQIFTREQIIEKIWG
N315 INSNSEMTIGNLTLNQSYLELQVSNKTMTLPNKEFQLLFMLAARPKQIFTREQIIEKIWG
NCTC8325 INSNSEMTIGNLTLNQSYLELQVSNKTMTLPNKEFQLLFMLAARPKQIFTREQIIEKIWG
Newman INSNSEMTIGNLTLNQSYLELQVSNKTMTLPNKEFQLLFMLAARPKQIFTREQIIEKIWG
USA300_FPR3757 INSNSEMTIGNLTLNQSYLELQVSNKTMTLPNKEFQLLFMLAARPKQIFTREQIIEKIWG
************************************************************
COL YDYEGDERTVDVHIKRLRQRLKKLNATLTIETVRGQGYKVENHV
N315 YDYEGDERTVDVHIKRLRQRLKKLNATLTIETVRGQGYKVENHV
NCTC8325 YDYEGDERTVDVHIKRLRQRLKKLNATLTIETVRGQGYKVENHV
Newman YDYEGDERTVDVHIKRLRQRLKKLNATLTIETVRGQGYKVENHV
USA300_FPR3757 YDYEGDERTVDVHIKRLRQRLKKLNATLTIETVRGQGYKVENHV
********************************************