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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005871000
- symbol?: hssS
- synonym:
- description?: sensor histidine kinase
- sensor histidine kinase
- two-component sensor histidine kinase
- heme sensor histidine kinase HssS
- two-component sensor histidine kinase, putative
- heme sensor protein hssS
- Sensor histidine kinase colocalized with HrtAB transporter
- ATPase
- HAMP domain protein
- hemin sensor histidine kinase
- integral membrane sensor signal transduction histidine kinase
- sensor kinase
- sensor kinase protein
- two component histidine kinase sensor
- two-component sensor histidine kinase sensor
- two component system histidine kinase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5943067..5944440
- synteny block?: BlockID0046160
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2301
08BA02176:
C248_2407
11819-97:
MS7_2380 (hssS)
6850:
RSAU_002197
71193:
ST398NM01_2415
ECT-R 2:
ECTR2_2222
ED133:
SAOV_2406
ED98:
SAAV_2427
HO 5096 0412:
SAEMRSA15_22600
JH1:
SaurJH1_2432
JH9:
SaurJH9_2386
JKD6008:
SAA6008_02400 (hssS)
JKD6159:
SAA6159_02266 (hssS)
LGA251:
SARLGA251_21450 (hssS)
M013:
M013TW_2320
MRSA252:
SAR2448
MSHR1132:
SAMSHR1132_21870
MSSA476:
SAS2253
Mu3:
SAHV_2346
Mu50:
SAV2362
MW2:
MW2283
RF122:
SAB2241
ST398:
SAPIG2415
T0131:
SAT0131_02550
TCH60:
HMPREF0772_10830 (hssS)
TW20:
SATW20_24940 (hssS)
USA300_TCH1516:
USA300HOU_2345 (hssS)
VC40:
SAVC_10680
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFKTLYARIAIYSITVILFSALISFVLTNVYYHYNLKASNDAKIMKTLKEARQYEQSAKP
N315 MFKTLYARIAIYSITVILFSALISFVLTNVYYHYNLKASNDAKIMKTLKEARQYEQSAKP
NCTC8325 MFKTLYARIAIYSITVILFSALISFVLTNVYYHYNLKASNDAKIMKTLKEARQYEQSAKP
Newman MFKTLYARIAIYSITVILFSALISFVLTNVYYHYNLKASNDAKIMKTLKEARQYEQSAKP
USA300_FPR3757 MFKTLYARIAIYSITVILFSALISFVLTNVYYHYNLKASNDAKIMKTLKEARQYEQSAKP
************************************************************
COL THIQQYFKHLGQMNYQIMTIDQKGHKTFYGEPFREDTLSQNAINNVLNNQDYHGIKDKPF
N315 THIQQYFKHLGQMNYQIMTVDQKGHKTFYGEPFREDTLSQNAINNVLNNKDYHGIKDKPF
NCTC8325 THIQQYFKHLGQMNYQIMTIDQKGHKTFYGEPFREDTLSQNAINNVLNNQDYHGIKDKPF
Newman THIQQYFKHLGQMNYQIMTIDQKGHKTFYGEPFREDTLSQNAINNVLNNQDYHGIKDKPF
USA300_FPR3757 THIQQYFKHLGQMNYQIMTIDQKGHKTFYGEPFREDTLSQNAINNVLNNQDYHGIKDKPF
*******************:*****************************:**********
COL ALFVTGFFDNVTDNTVGINFKTKDGSIAVFMRPDIGETFSEFRTFLAVLLMLLLFISISL
N315 ALFVTGFFDNVTDNTVGINFKTKDGSIAVFMRPDIGETFSEFRTFLAVLLMLLLFISISL
NCTC8325 ALFVTGFFDNVTDNTVGINFKTKDGSIAVFMRPDIGETFSEFRTFLAVLLMLLLFISISL
Newman ALFVTGFFDNVTDNTVGINFKTKDGSIAVFMRPDIGETFSEFRTFLAVLLMLLLFISISL
USA300_FPR3757 ALFVTGFFDNVTDNTVGINFKTKDGSIAVFMRPDIGETFSEFRTFLAVLLMLLLFISISL
************************************************************
COL VIASTYSIIRPVKKLKLATERLIDGDFETPIKQTRKDEIGTLQYHFNKMRESLGQVDQMR
N315 VIASTYSIIRPVKKLKLATERLIDGDFETPIKQTRKDEIGTLQYHFNKMRESLGQVDQMR
NCTC8325 VIASTYSIIRPVKKLKLATERLIDGDFETPIKQTRKDEIGTLQYHFNKMRESLGQVDQMR
Newman VIASTYSIIRPVKKLKLATERLIDGDFETPIKQTRKDEIGTLQYHFNKMRESLGQVDQMR
USA300_FPR3757 VIASTYSIIRPVKKLKLATERLIDGDFETPIKQTRKDEIGTLQYHFNKMRESLGQVDQMR
************************************************************
COL QHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQYINDIYTITTQLSGLTTELLLLSE
N315 QHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQYINDIYTITTQLSGLTTELLLLSE
NCTC8325 QHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQYINDIYTITTQLSGLTTELLLLSE
Newman QHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQYINDIYTITTQLSGLTTELLLLSE
USA300_FPR3757 QHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQYINDIYTITTQLSGLTTELLLLSE
************************************************************
COL LDNHQHLLFDDKIQVNQLIKDIIRHEQFAADEKSLIILADLESINFLGNQRLLHQALSNL
N315 LDNHQHLLFDDKIQVDQLIKDIIRHEQFAADEKSLIILADLESINFLGNQRLLHQALSNL
NCTC8325 LDNHQHLLFDDKIQVNQLIKDIIRHEQFAADEKSLIILADLESINFLGNQRLLHQALSNL
Newman LDNHQHLLFDDKIQVNQLIKDIIRHEQFAADEKSLIILADLESINFLGNQRLLHQALSNL
USA300_FPR3757 LDNHQHLLFDDKIQVNQLIKDIIRHEQFAADEKSLIILADLESINFLGNQRLLHQALSNL
***************:********************************************
COL LINAIKYTDVGGAIDIALQHSHNNIIFTISNDGSPISPQAEARLFERFYKVSKHDNSNGL
N315 LINAIKYTDVGGAIDIALQHSHNNIIFTISNDGSPISPQAEARLFERFYKVSKHDNSNGL
NCTC8325 LINAIKYTDVGGAIDIALQHSHNNIIFTISNDGSPISPQAEARLFERFYKVSKHDNSNGL
Newman LINAIKYTDVGGAIDIALQHSHNNIIFTISNDGSPISPQAEARLFERFYKVSKHDNSNGL
USA300_FPR3757 LINAIKYTDVGGAIDIALQHSHNNIIFTISNDGSPISPQAEARLFERFYKVSKHDNSNGL
************************************************************
COL GLAITKSIIELHHGTIQFTQSNEYVTTFTITLPNNSL
N315 GLAITKSIIELHHGTIQFTQSNEYVTTFTITLPNNSH
NCTC8325 GLAITKSIIELHHGTIQFTQSNEYVTTFTITLPNNSL
Newman GLAITKSIIELHHGTIQFTQSNEYVTTFTITLPNNSL
USA300_FPR3757 GLAITKSIIELHHGTIQFTQSNEYVTTFTITLPNNSL
************************************