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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005883000
- symbol?: —
- synonym:
- description?: lipoprotein, putative
- lipoprotein, putative
- lipoprotein SA2158
- Membrane lipoprotein
- putative lipoprotein
- TpgX protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5956213..5956842
- synteny block?: BlockID0046280
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2307 (tpgX)
08BA02176:
C248_2415
11819-97:
MS7_2386
6850:
RSAU_002206
71193:
ST398NM01_2422
ECT-R 2:
ECTR2_2228
ED133:
SAOV_2415c
ED98:
SAAV_2433
HO 5096 0412:
SAEMRSA15_22690
JH1:
SaurJH1_2438
JH9:
SaurJH9_2392
JKD6008:
SAA6008_02406
JKD6159:
SAA6159_02272
LGA251:
SARLGA251_21540
M013:
M013TW_2329
MRSA252:
SAR2457
MSHR1132:
SAMSHR1132_21960
MSSA476:
SAS2259
Mu3:
SAHV_2352
Mu50:
SAV2368
MW2:
MW2289
RF122:
SAB2248c
ST398:
SAPIG2422
T0131:
SAT0131_02558 (murD)
TCH60:
—
TW20:
SATW20_25000
USA300_TCH1516:
USA300HOU_2351
VC40:
SAVC_10710
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKRLVTGLLALSLFLAACGQDSDQQKDGNKEKDDKAKTEQQDKKTNDSSKDKKDNKDDSK
N315 MKRLVTGLLALSLFLAACGQDSDQQKDSNKEKDDKAKTEQQDKKTNDSSKDKKDNKDDSK
NCTC8325 MKRLVTGLLALSLFLAACGQDSDQQKDGNKEKDDKAKTEQQDKKTNDSSKDKKDNKDDSK
Newman MKRLVTGLLALSLFLAACGQDSDQQKDGNKEKDDKAKTEQQDKKTNDSSKDKKDNKDDSK
USA300_FPR3757 MKRLVTGLLALSLFLAACGQDSDQQKDGNKEKDDKAKTEQQDKKTNDSSKDKKDNKDDSK
***************************.********************************
COL DVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSSNNQANNNQKSSYVAPYYGQNAAPV
N315 DVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSS-----NNQKSSYVAPYYGQNAAPV
NCTC8325 DVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSSNNQANNNQKSSYVAPYYGQNAAPV
Newman DVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSSNNQANNNQKSSYVAPYYGQNAAPV
USA300_FPR3757 DVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSSNNQANNNQKSSYVAPYYGQNAAPV
************************************ *******************
COL ARQIYPFNGNKNQALQQLPNFQTALNAANNEANKFGSNNKVYNDYSIEEHNGNYKYVFSF
N315 ARQIYPFNGNKTQALQQLPNFQTALNAANNEANKFGSNNKVYNDYSIEEHNGNYKYVFSF
NCTC8325 ARQIYPFNGNKNQALQQLPNFQTALNAANNEANKFGSNNKVYNDYSIEEHNGNYKYVFSF
Newman ARQIYPFNGNKNQALQQLPNFQTALNAANNEANKFGSNNKVYNDYSIEEHNGNYKYVFSF
USA300_FPR3757 ARQIYPFNGNKNQALQQLPNFQTALNAANNEANKFGSNNKVYNDYSIEEHNGNYKYVFSF
***********.************************************************
COL KDPNANGKYSIVTVDYTGQAMVTDPNYQQ
N315 KDPNANGKYSIVTVDYTGQAMVTDPNYQQ
NCTC8325 KDPNANGKYSIVTVDYTGQAMVTDPNYQQ
Newman KDPNANGKYSIVTVDYTGQAMVTDPNYQQ
USA300_FPR3757 KDPNANGKYSIVTVDYTGQAMVTDPNYQQ
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