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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005918000
- symbol?: —
- synonym:
- description?: peptidase
- peptidase
- DUF2268 domain-containing protein
- metallopeptidase
- zinc-dependent protease, putative
- Zn-dependent protease-like protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5984795..5985319
- synteny block?: BlockID0046620
- occurrence?: in 88% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2326
08BA02176:
C248_2436
11819-97:
—
6850:
RSAU_002227
71193:
ST398NM01_2442
ECT-R 2:
ECTR2_2248
ED133:
SAOV_2435
ED98:
SAAV_2454
HO 5096 0412:
SAEMRSA15_22880
JH1:
SaurJH1_2461
JH9:
SaurJH9_2413
JKD6008:
SAA6008_02430
JKD6159:
—
LGA251:
—
M013:
M013TW_2349
MRSA252:
SAR2477
MSHR1132:
SAMSHR1132_22170
MSSA476:
SAS2279
Mu3:
SAHV_2373
Mu50:
SAV2389
MW2:
MW2310
RF122:
SAB2268
ST398:
SAPIG2442
T0131:
SAT0131_02579
TCH60:
HMPREF0772_10798
TW20:
SATW20_25190
USA300_TCH1516:
USA300HOU_2371
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 MYKINIIRSDSVYKNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQF
Newman MYKINIIRSDSVYNNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQF
USA300_FPR3757 MYKINIIRSDSVYNNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQF
*************:**********************************************
N315 LDAFQISPKDLRMSDQMSIQYLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLG
Newman LDAFQISPKDLRMSDQMSIQYLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLG
USA300_FPR3757 LDAFQISPKDLRMSDQMSIQYLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLG
************************************************************
N315 DSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSLIAHEVNHNMRYQYIDWDGGS
Newman DRQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSLIAHEVNHNMRYQYIDWDGGS
USA300_FPR3757 DRQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSLIAHEVNHNMRYQYIDWDGGS
* **********************************************************
N315 LIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
Newman LIELIIAEGLAENYVESLYGKAHIGPWVTNTN----------------------------
USA300_FPR3757 LIELIIAEGLAENYVESLYGKAHIGPWVTNTN----------------------------
********************************
N315 YGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWH
Newman ------------------------------------------------------------
USA300_FPR3757 ------------------------------------------------------------
N315 THTL
Newman ----
USA300_FPR3757 ----