From AureoWiki
Jump to navigation Jump to search

NCBI: 10-JUN-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL2387
  • pan locus tag?: SAUPAN005918000
  • symbol: SACOL2387
  • pan gene symbol?: —
  • synonym:
  • product:

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: pseudogene
  • locus tag: SACOL2387
  • symbol: SACOL2387
  • product:
  • replicon: chromosome
  • strand: +
  • coordinates: 2446341..2447255
  • length: 915
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGTATAAAATCAATATTATTAGATCAGATTCCGTCTATAATAATATACTCAAGGCACCA
    ATAAACGACCGTGATTCAATTTTCACTAAAGAAATATTAGTACCTTTTAAAAAGAAATTT
    GAGGTACAACATATGCCTATTTATAATGATGACAAACAGACAATGAGTGCGATTCAATTT
    TTAGATGCCTTTCAAATTTCTCCCAAAGATTTACGCATGTCTGACCAAATGTCAATACAA
    TACCTGAATAATGATTTCTGGAGTAATTGCGAAAAATATTTAAAAGTTGCTATAGATCAA
    TTTTCAAATTATAGTATCTCATCTCAAGTTTCTAACTATCATTTCACAGTATTACTTGGA
    GATCGCCAAAAACCACTTATGTATCTAAATAAAAATCGCGGTGGTGATGGTGGCATACCA
    GGTTATATTATGATTTATTTAGTGCCGAGTACAAGTACAATTAATTCTATGAAAAGCTTA
    ATTGCACATGAAGTAAATCATAATATGCGCTATCAATATATTGATTGGGATGGCGGAAGT
    TTGATTGAATTGATTATTGCAGAAGGATTAGCTGAAAACTATGTAGAATCATTGTATGGT
    AAAGCGCATATTGGACCGTGGGTAACAAATACTAATTGAAGTCGTGATAACGTAAAAATT
    AAAAATACTATTTATAATCATTTACATTTAAAGCATATATTTGAATCGATGCCTTATCTC
    TATGGTGATGATATTAATAAAATTCAAGGTAGGCCTATCGTTGGCTTATCTCATGCTGCC
    GGGTATGCATGTGGCTATCACTTGGTAAAATACTTTTTACAAAAAACAAACATACCTATT
    GAAGTTGCTACAACACTTCCAGCACAAAAAATAATAAATGAGGTGACTGAATTTTGGCAT
    ACACATACACTTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    915

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL2387
  • symbol: SACOL2387
  • description:
  • length:
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

⊟Function[edit | edit source]

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq:
  • UniProt:

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

Retrieved from "http://aureowiki.med.uni-greifswald.de/index.php?title=SACOL2387&oldid=81335"