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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005938000
- symbol?: —
- synonym:
- description?: zinc ABC transporter substrate-binding protein
- zinc ABC transporter substrate-binding protein
- Zn-binding lipoprotein adcA-like protein
- ABC transporter substrate-binding protein
- metal-binding lipoprotein, putative
- zinc ABC transporter substrate-binding lipoprotein AdcA
- ABC superfamily ATP binding cassette transporter, binding protein
- ABC transporter ATP-binding protein
- Candidate zinc-binding lipoprotein ZinT
- High-affinity zinc uptake system protein znuA
- periplasmic solute binding family protein
- putative solute binding lipoprotein
- putative zinc-binding lipo protein ZinT
- ribulose-phosphate 3-epimerase
- zinc-binding lipoprotein AdcA
- Zn-binding lipoprotein adcA
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6004037..6005632
- synteny block?: BlockID0046820
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2343 (zinT)
08BA02176:
C248_2453
11819-97:
MS7_2421
6850:
RSAU_002244
71193:
ST398NM01_2459
ECT-R 2:
ECTR2_2265
ED133:
SAOV_2452c
ED98:
SAAV_2471
HO 5096 0412:
SAEMRSA15_23050
JH1:
SaurJH1_2478
JH9:
SaurJH9_2430
JKD6008:
SAA6008_02447
JKD6159:
SAA6159_02307
LGA251:
SARLGA251_21880
M013:
M013TW_2367
MRSA252:
SAR2496
MSHR1132:
SAMSHR1132_22340
MSSA476:
SAS2297
Mu3:
SAHV_2390
Mu50:
SAV2406
MW2:
MW2328
RF122:
SAB2286c
ST398:
SAPIG2459
T0131:
SAT0131_02597
TCH60:
HMPREF0772_10781 (adcA)
TW20:
SATW20_25360
USA300_TCH1516:
USA300HOU_2386
VC40:
SAVC_10900
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKKLGMLLLVPAVTLSLAACGNDDGKDKDGKVTIKTTVYPLQSFAEQIGGKHVKVSSIY
N315 MKKKLGMLLLVPAVTLSLAACGNDDGKDKDGKVTIKTTVYPLQSFAEQIGGKHVKVSSIY
NCTC8325 MKKKLGMLLLVPAVTLSLAACGNDDGKDKDGKVTIKTTVYPLQSFAEQIGGKHVKVSSIY
Newman MKKKLGMLLLVPAVTLSLAACGNDDGKDKDGKVTIKTTVYPLQSFAEQIGGKHVKVSSIY
USA300_FPR3757 MKKKLGMLLLVPAVTLSLAACGNDDGKDKDGKVTIKTTVYPLQSFAEQIGGKHVKVSSIY
************************************************************
COL PAGTDLHSYEPTQKDILSASKSDLFMYTGDNLDPVAKKVASTIKDKDKKLSLEDKLDKAK
N315 PAGTDLHSYEPTQKDILSASKSDLFMYTGDNLDPVAKKVASTIKDKDKKRSLEDKLDKAK
NCTC8325 PAGTDLHSYEPTQKDILSASKSDLFMYTGDNLDPVAKKVASTIKDKDKKLSLEDKLDKAK
Newman PAGTDLHSYEPTQKDILSASKSDLFMYTGDNLDPVAKKVASTIKDKDKKLSLEDKLDKAK
USA300_FPR3757 PAGTDLHSYEPTQKDILSASKSDLFMYTGDNLDPVAKKVASTIKDKDKKLSLEDKLDKAK
************************************************* **********
COL LLTDQHEHGEEHEHEGHDHEKEEHHHHHGGYDPHVWLDPKINQTFAKEIKDELVKKDPKH
N315 LLTDQHEHGEEHEHEGHDHEKEE-HHHHGGYDPHVWLDPKINQTFAKEIKDELVKKDPKH
NCTC8325 LLTDQHEHGEEHEHEGHDHEKEEHHHHHGGYDPHVWLDPKINQTFAKEIKDELVKKDPKH
Newman LLTDQHEHGEEHEHEGHDHEKEEHHHHHGGYDPHVWLDPKINQTFAKEIKDELVKKDPKH
USA300_FPR3757 LLTDQHEHGEEHEHEGHDHEKEEHHHHHGGYDPHVWLDPKINQTFAKEIKDELVKKDPKH
*********************** ************************************
COL KDDYEKNYKKLNDDLKKIDNDMKQVTKDKQGNAVFISHESIGYLADCYGFVQKGIQNMNA
N315 KDDYEKNYKKLNDDLKKIDNDMKQVTKDKQGNAVFISHESIGYLADRYGFVQKGIQNMNA
NCTC8325 KDDYEKNYKKLNDDLKKIDNDMKQVTKDKQGNAVFISHESIGYLADCYGFVQKGIQNMNA
Newman KDDYEKNYKKLNDDLKKIDNDMKQVTKDKQGNAVFISHESIGYLADCYGFVQKGIQNMNA
USA300_FPR3757 KDDYEKNYKKLNDDLKKIDNDMKQVTKDKQGNAVFISHESIGYLADCYGFVQKGIQNMNA
********************************************** *************
COL EDPSQKELTKIVKEIRDSNAKYILYEDNVANKVTETIRKETDAKPLKFYNMESLNKEQQK
N315 EDPSQKELTKIVKEIRDSNAKYILYEDNVANKVTETIRKETDAKPLKFYNMESLNKEQQK
NCTC8325 EDPSQKELTKIVKEIRDSNAKYILYEDNVANKVTETIRKETDAKPLKFYNMESLNKEQQK
Newman EDPSQKELTKIVKEIRDSNAKYILYEDNVANKVTETIRKETDAKPLKFYNMESLNKEQQK
USA300_FPR3757 EDPSQKELTKIVKEIRDSNAKYILYEDNVANKVTETIRKETDAKPLKFYNMESLNKEQQK
************************************************************
COL KDNITYQSLMKSNIENIGKALDSGVKVKDDKAESKHDKAISDGYFKDEQVKDRELSDYAG
N315 KDNITYQSLMKSNIENIGKALDSGVKVKDDKAESKHDKAISDGYFKDEQVKDRELSDYAG
NCTC8325 KDNITYQSLMKSNIENIGKALDSGVKVKDDKAESKHDKAISDGYFKDEQVKDRELSDYAG
Newman KDNITYQSLMKSNIENIGKALDSGVKVKDDKAESKHDKAISDGYFKDEQVKDRELSDYAG
USA300_FPR3757 KDNITYQSLMKSNIENIGKALDSGVKVKDDKAESKHDKAISDGYFKDEQVKDRELSDYAG
************************************************************
COL EWQSVYPYLKDGTLDEVMEHKAENDPKKSAKDLKAYYDKGYKTDITNIDIKGNEITFTKD
N315 EWQSVYPYLKDGTLDEVMEHKAENDPKKSAKDLKAYYDKGYKTDITNIDIKGNEITFTKD
NCTC8325 EWQSVYPYLKDGTLDEVMEHKAENDPKKSAKDLKAYYDKGYKTDITNIDIKGNEITFTKD
Newman EWQSVYPYLKDGTLDEVMEHKAENDPKKSAKDLKAYYDKGYKTDITNIDIKGNEITFTKD
USA300_FPR3757 EWQSVYPYLKDGTLDEVMEHKAENDPKKSAKDLKAYYDKGYKTDITNIDIKGNEITFTKD
************************************************************
COL GKKHTGKYEYNGKKTLKYPKGNRGVRFMFKLVDGNDKDLPKFIQFSDHNIAPKKAEHFHI
N315 GKKHTGKYEYNGKKTLKYPKGNRGVRFMFKLVDGNDKDLPKFIQFSDHNIAPKKAEHFHI
NCTC8325 GKKHTGKYEYNGKKTLKYPKGNRGVRFMFKLVDGNDKDLPKFIQFSDHNIAPKKAEHFHI
Newman GKKHTGKYEYNGKKTLKYPKGNRGVRFMFKLVDGNDKDLPKFIQFSDHHIAPKKAEHFHI
USA300_FPR3757 GKKHTGKYEYNGKKTLKYPKGNRGVRFMFKLVDGNDKDLPKFIQFSDHNIAPKKAEHFHI
************************************************:***********
COL FMGNDNDALLKEMDNWPTYYPSKLNKDQIKEEMLAH---------------
N315 FMGNDNDALLKEMDNWPTYYPSKLNKDQIKEEMLAH---------------
NCTC8325 FMGNDNDALLKEMDNWPTYYPSKLNKDQIKEEMLAH---------------
Newman FMGNDNDALLKRMDYWPTYYPSKLNKDPIKEEMLAHYFNRFAHSTQLLIAE
USA300_FPR3757 FMGNDNDALLKEMDNWPTYYPSKLNKDQIKEEMLAH---------------
***********.** ************ ********