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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006004000
- symbol?: —
- synonym:
- description?: hypothetical protein with DUF419
- hypothetical protein with DUF419
- molecular chaperone GroEL
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6063569..6064168
- synteny block?: BlockID0047480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2386
08BA02176:
C248_2500
11819-97:
MS7_2463
6850:
RSAU_002289
71193:
ST398NM01_2502
ECT-R 2:
ECTR2_2307
ED133:
SAOV_2500c
ED98:
SAAV_2516
HO 5096 0412:
SAEMRSA15_23490
JH1:
SaurJH1_2525
JH9:
SaurJH9_2476
JKD6008:
SAA6008_02491
JKD6159:
SAA6159_02347
LGA251:
SARLGA251_22300
M013:
M013TW_2412
MRSA252:
SAR2539
MSHR1132:
SAMSHR1132_22770
MSSA476:
SAS2341
Mu3:
SAHV_2433
Mu50:
SAV2449
MW2:
MW2373
RF122:
SAB2331c
ST398:
SAPIG2502
T0131:
SAT0131_02649 (rpsP)
TCH60:
HMPREF0772_10739
TW20:
SATW20_25780
USA300_TCH1516:
USA300HOU_2439
VC40:
SAVC_11120
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSEKQSNEQVEAFLNKESQWQEEYKYLRALIFNETELEEAYKWMHPCYTLNNKNVVLIHG
N315 MSEKQSNEQVEAFLNKESQWQEEYKYLRALIFNETELEEAYKWMHPCYTLNNKNVVLIHG
NCTC8325 MSEKQSNEQVEAFLNKESQWQEEYKYLRALIFNETELEEAYKWMHPCYTLNNKNVVLIHG
Newman MSEKQSNEQVEAFLNKESQWQEEYKYLRALIFNETELEEAYKWMHPCYTLNNKNVVLIHG
USA300_FPR3757 MSEKQSNEQVEAFLNKESQWQEEYKYLRALIFNETELEEAYKWMHPCYTLNNKNVVLIHG
************************************************************
COL FKNYVALLFHKGAILEDKYHTLIQQTEKVQAARQLRFENLTEIQARTEEIKYYLAEAIKA
N315 FKNYVALLFHKGAILEDKYHTLIQQTEKVQAARQLRFENLTEIQARTEEIKYYLAEAIKA
NCTC8325 FKNYVALLFHKGAILEDKYHTLIQQTEKVQAARQLRFENLTEIQARTEEIKYYLAEAIKA
Newman FKNYVALLFHKGAILEDKYHTLIQQTEKVQAARQLRFENLTEIQARTEEIKYYLAEAIKA
USA300_FPR3757 FKNYVALLFHKGAILEDKYHTLIQQTEKVQAARQLRFENLTEIQARTEEIKYYLAEAIKA
************************************************************
COL EKAGKKVEMKKTEEYVIPKELEAKFEEMPQLESSFYKLTPGRQHQYIYHIGQAKRSETRQ
N315 EKAGKKVEMKKTEEYVIPKELEAKFEEMPQLESSFYKLTPGRQHQYIYHIGQAKRSETKQ
NCTC8325 EKAGKKVEMKKTEEYVIPKELEAKFEEMPQLESSFYKLTPGRQHQYIYHIGQAKRSETRQ
Newman EKAGKKVEMKKTEEYVIPKELEAKFEEMPQLESSFYKLTPGRQHQYIYHIGQAKRSETRQ
USA300_FPR3757 EKAGKKVEMKKTEEYVIPKELEAKFEEMPQLESSFYKLTPGRQHQYIYHIGQAKRSETRQ
**********************************************************:*
COL KRVEKYINQILEGKGMHDK
N315 KRVEKYINQILEGKGMHDK
NCTC8325 KRVEKYINQILEGKGMHDK
Newman KRVEKYINQILEGKGMHDK
USA300_FPR3757 KRVEKYINQILEGKGMHDK
*******************