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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006006000
- symbol?: —
- description?: amino acid:proton symporter
- amino acid:proton symporter
- amino acid permease
- amino acid permease, putative
- APC family permease
- amino acid transporter
- amino acid permease-associated region
- amino acid permease family protein
- amino acid transporter permease
- APC family amino acid-polyamine-organocation transporter
- putative amino acid permease
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6064350..6065987
- synteny block?: BlockID0047500
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2387
08BA02176:
C248_2501
11819-97:
MS7_2464
6850:
RSAU_002290
71193:
ST398NM01_2503
ECT-R 2:
ECTR2_2308
ED133:
SAOV_2501
ED98:
SAAV_2517
HO 5096 0412:
SAEMRSA15_23500
JH1:
SaurJH1_2526
JH9:
SaurJH9_2477
JKD6008:
SAA6008_02492
JKD6159:
SAA6159_02348
LGA251:
SARLGA251_22310
M013:
M013TW_2413
MRSA252:
SAR2540
MSHR1132:
SAMSHR1132_22780
MSSA476:
SAS2342
Mu3:
SAHV_2434
Mu50:
SAV2450
MW2:
MW2374
RF122:
SAB2332
ST398:
SAPIG2503
T0131:
SAT0131_02650
TCH60:
HMPREF0772_10738
TW20:
SATW20_25790
USA300_TCH1516:
USA300HOU_2440
VC40:
SAVC_11125
⊟Genome Viewer[edit | edit source]
| COL chromosome | |
| N315 chromosome | |
| NCTC8325 chromosome | |
| Newman chromosome | |
| USA300_FPR3757 chromosome |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
N315 MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPVAIISWVLGFLVIGTIA
NCTC8325 MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
Newman MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
USA300_FPR3757 MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
*******************************************.****************
COL YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
N315 YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
NCTC8325 YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
Newman YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
USA300_FPR3757 YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
************************************************************
COL HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
N315 HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
NCTC8325 HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
Newman HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
USA300_FPR3757 HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
************************************************************
COL IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
N315 IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
NCTC8325 IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
Newman IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
USA300_FPR3757 IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
************************************************************
COL IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
N315 IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
NCTC8325 IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
Newman IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
USA300_FPR3757 IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
************************************************************
COL LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
N315 LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
NCTC8325 LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
Newman LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
USA300_FPR3757 LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
************************************************************
COL IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
N315 IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
NCTC8325 IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
Newman IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
USA300_FPR3757 IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
************************************************************
COL ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
N315 ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
NCTC8325 ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
Newman ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
USA300_FPR3757 ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
************************************************************
COL FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
N315 FIGSKEFKGLNMIHYPFDFIVIIVVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
NCTC8325 FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
Newman FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
USA300_FPR3757 FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
***********************:************************************
COL SKSSH
N315 SKSSH
NCTC8325 SKSSH
Newman SKSSH
USA300_FPR3757 SKSSH
*****