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Summary[edit | edit source]

  • pan ID?: SAUPAN006006000
  • symbol?: aimA
  • synonym:
  • description?: amino acid:proton symporter

      descriptions from strain specific annotations:

    • amino acid:proton symporter
    • amino acid permease
    • APC family permease
    • amino acid permease, putative
    • amino acid transporter
    • amino acid permease-associated region
    • amino acid permease family protein
    • amino acid transporter permease
    • APC family amino acid-polyamine-organocation transporter
    • putative amino acid permease
  • strand?: +
  • coordinates?: 6064350..6065987
  • synteny block?: BlockID0047500
  • occurrence?: in 100% of 34 strains

aimA (ybeC) : amino acid:proton internalization symport protein [1]

AimA is the primary amino acid import protein for exogenous serine, glutamate and asparagine transport in firmicutes.

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2387
    08BA02176:
    C248_2501
    11819-97:
    MS7_2464
    6850:
    RSAU_002290
    71193:
    ST398NM01_2503
    ECT-R 2:
    ECTR2_2308
    ED133:
    SAOV_2501
    ED98:
    SAAV_2517
    HO 5096 0412:
    SAEMRSA15_23500
    JH1:
    SaurJH1_2526
    JH9:
    SaurJH9_2477
    JKD6008:
    SAA6008_02492
    JKD6159:
    SAA6159_02348
    JSNZ:
    JSNZ_002426
    LGA251:
    SARLGA251_22310
    M013:
    M013TW_2413
    MRSA252:
    SAR2540
    MSHR1132:
    SAMSHR1132_22780
    MSSA476:
    SAS2342
    Mu3:
    SAHV_2434
    Mu50:
    SAV2450
    MW2:
    MW2374
    RF122:
    SAB2332
    ST398:
    SAPIG2503
    T0131:
    SAT0131_02650
    TCH60:
    HMPREF0772_10738
    TW20:
    SATW20_25790
    USA300_TCH1516:
    USA300HOU_2440
    VC40:
    SAVC_11125

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
    N315            MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPVAIISWVLGFLVIGTIA
    NCTC8325        MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
    Newman          MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
    USA300_FPR3757  MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPAAIISWVLGFLVIGTIA
                    *******************************************.****************

    COL             YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
    N315            YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
    NCTC8325        YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
    Newman          YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
    USA300_FPR3757  YNYIEIGTMFPQSGGMSNYAQYTHGSLLGFIAAWANWVSLVTIIPIEAVSAVQYMSSWPW
                    ************************************************************

    COL             HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
    N315            HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
    NCTC8325        HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
    Newman          HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
    USA300_FPR3757  HWAKPMRYLMENGSISTYGLLAVYLIIVIFSLLNYWSVKLLTSFTSLISVFKLGVPMLTI
                    ************************************************************

    COL             IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
    N315            IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
    NCTC8325        IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
    Newman          IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
    USA300_FPR3757  IMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGIIFSFNSFQTIINMGSEIKNPEKN
                    ************************************************************

    COL             IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
    N315            IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
    NCTC8325        IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
    Newman          IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
    USA300_FPR3757  IARGIAISLSISAVLYIILQSTFITSMPQSMLQHSGWNGINFNSPFADLAILLGINWLAI
                    ************************************************************

    COL             LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
    N315            LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
    NCTC8325        LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
    Newman          LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
    USA300_FPR3757  LLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHIPKFLGKMNEKYHIPRVAIIFNAIISM
                    ************************************************************

    COL             IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
    N315            IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
    NCTC8325        IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
    Newman          IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
    USA300_FPR3757  IMVTLFRDWGTLAAVISTATLVAYLTGPTTVIALRKMGPTMTRPFRAKILKVMAPLSFVL
                    ************************************************************

    COL             ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
    N315            ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
    NCTC8325        ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
    Newman          ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
    USA300_FPR3757  ASLAIYWAMWPTTAEVILIIILGLPIYFFYEYRMNWRNTKKQIGGSLWIIVYLIVLSILS
                    ************************************************************

    COL             FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
    N315            FIGSKEFKGLNMIHYPFDFIVIIVVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
    NCTC8325        FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
    Newman          FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
    USA300_FPR3757  FIGSKEFKGLNMIHYPFDFIVIIIVALIFYYIGTTSSFESVYFRRATRINTKMRESLNNE
                    ***********************:************************************

    COL             SKSSH
    N315            SKSSH
    NCTC8325        SKSSH
    Newman          SKSSH
    USA300_FPR3757  SKSSH
                    *****

  1. Anika Klewing, Byoung-Mo Koo, Larissa Krüger, Anja Poehlein, Daniel Reuß, Rolf Daniel, Carol A Gross, Jörg Stülke
    Resistance to serine in Bacillus subtilis: identification of the serine transporter YbeC and of a metabolic network that links serine and threonine metabolism.
    Environ Microbiol: 2020, 22(9);3937-3949
    [PubMed:32743959] [WorldCat.org] [DOI] (I p)
    Larissa Krüger, Christina Herzberg, Hermann Rath, Tiago Pedreira, Till Ischebeck, Anja Poehlein, Jan Gundlach, Rolf Daniel, Uwe Völker, Ulrike Mäder, Jörg Stülke
    Essentiality of c-di-AMP in Bacillus subtilis: Bypassing mutations converge in potassium and glutamate homeostasis.
    PLoS Genet: 2021, 17(1);e1009092
    [PubMed:33481774] [WorldCat.org] [DOI] (I e)
    Janek Meißner, Manuel Königshof, Katrin Wrede, Robert Warneke, Mohammad Saba Yousef Mardoukhi, Fabian M Commichau, Jörg Stülke
    Control of asparagine homeostasis in Bacillus subtilis: identification of promiscuous amino acid importers and exporters.
    J Bacteriol: 2024, 206(2);e0042023
    [PubMed:38193659] [WorldCat.org] [DOI] (I p)
    Robert Warneke, Christina Herzberg, Richard Daniel, Björn Hormes, Jörg Stülke
    Control of three-carbon amino acid homeostasis by promiscuous importers and exporters in Bacillus subtilis: role of the "sleeping beauty" amino acid exporters.
    mBio: 2024, 15(4);e0345623
    [PubMed:38470260] [WorldCat.org] [DOI] (I p)