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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006040000
- symbol?: —
- synonym:
- description?: DUF1433 domain-containing protein
- DUF1433 domain-containing protein
- lipoprotein, putative
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6094539..6097058
- synteny block?: BlockID0047840
- occurrence?: in 52% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_2526
11819-97:
—
6850:
RSAU_002314
71193:
ST398NM01_2526
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
SAA6008_02516
JKD6159:
—
LGA251:
SARLGA251_22630
M013:
—
MRSA252:
SAR2562
MSHR1132:
SAMSHR1132_23000
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
SAPIG2526
T0131:
SAT0131_02674 (tsf)
TCH60:
HMPREF0772_10714
TW20:
SATW20_26030
USA300_TCH1516:
USA300HOU_2466
VC40:
SAVC_11250
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKKHVFIIIGVILCICTVSTVMHFKMKYDEKEKQKAIYYKEQQERITLYLKHNTKETNT
NCTC8325 MSKKHVFIIIGVILCICTVSTVMHFKMKYDEKEKQKAIYYKEQQERITLYLKHNTKETNT
Newman MSKKHVFIIIGVILCICTVSTVMHFKMKYDEKEKQKAIYYKEQQERITLYLKHNTKETNT
USA300_FPR3757 MSKKHVFIIIGVILCICTVSTVMHFKMKYDEKEKQKAIYYKEQQERITLYLKHNTKETNT
************************************************************
COL IKSVHFTNLETSPMGSAVIEGYINENKEDDFTAYASPEHNYQFGGAMIKSEGVDKLLKPA
NCTC8325 IKSVHFTNLETSPMGSAVIEGYINENKEDDFTAYASPEHNYQFGGAMIKSEGVDKLLKPA
Newman IKSVHFTNLETSPMGSAVIEGYINENKEDDFTAYASPEHNYQFGGAMIKSEGVDKLLKPA
USA300_FPR3757 IKSVHFTNLETSPMGSAVIEGYINENKEDDFTAYASPEHNYQFGGAMIKSEGVDKLLKPA
************************************************************
COL HERKSPEKIKEELDKKEGH
NCTC8325 HERKSPEKIKEELDKKEGH
Newman HERKSPEKIKEELDKKEGH
USA300_FPR3757 HERKSPEKIKEELDKKEGH
*******************