PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006097000
• symbol^?: fnbB
• synonym:
• description^?: fibronectin binding protein B

  descriptions from strain specific annotations:

  • fibronectin binding protein B
  • fibronectin-binding protein A
  • fibronectin binding protein B precursor
  • fibronectin-binding protein FnbB
  • cell wall anchor domain-containing protein
  • fibronectin-binding protein
  • fibronectin-binding protein precursor
• strand^?: -
• coordinates^?: 6148339..6177780
• synteny block^?: BlockID0048340
• occurrence^?: in 73% of 33 strains

⊟Orthologs

COL:
SACOL2509 (fnbB)
N315:
SA2290 (fnbB)
NCTC8325:
SAOUHSC_02802
Newman:
NWMN_2397 (fnbB)
USA300_FPR3757:
SAUSA300_2440 (fnbB)
04-02981:
SA2981_2438 (fnbB)
08BA02176:
—
11819-97:
MS7_2504
6850:
RSAU_002340 (fnbB)
71193:
—
ECT-R 2:
ECTR2_2354
ED133:
SAOV_2544c
ED98:
SAAV_2566 (fnbB)
HO 5096 0412:
—
JH1:
SaurJH1_2577
JH9:
SaurJH9_2525
JKD6008:
SAA6008_02536
JKD6159:
—
LGA251:
SARLGA251_22760 (fnbB)
M013:
M013TW_2467
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS2387 (fnbB)
Mu3:
SAHV_2486 (fnbB)
Mu50:
SAV2502 (fnbB)
MW2:
MW2420 (fnbB)
RF122:
—
ST398:
—
T0131:
—
TCH60:
HMPREF0772_10696 (fnbB)
TW20:
SATW20_26210 (fnbB)
USA300_TCH1516:
USA300HOU_2490 (fnbB)
VC40:
SAVC_11375

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKSNLRYGIRKHKLGAASVFLGTMIVVGMGQEKEAAASEQNNTTVEESGSSATESKASET
  N315            MKSNLRYGIRKHKLGAASVFLGTMIVVGMGQEKEAAASEQNNTTVEESGSSATESKASET
  NCTC8325        -----------------------MIVVGMGQEKEAAASEQNNTTVEESGSSATESKASET
  Newman          MKSNLRYGIRKHKLGAASVFLGTMIVVGMGQEKEAAASEQNNTTVEESGSSATESKASET
  USA300_FPR3757  MKSNLRYGIRKHKLGAASVFLGTMIVVGMGQEKEAAASEQNNTTVEESGSSATESKASET
                                         *************************************
  
  COL             QTTTNNVNTIDETQSYSATSTEQPSQSTQVTTEEAPKTVQAPKVET---SRVDLPSEKVA
  N315            QTTTNNVNTIDETQSYSATSTEQPSKSTQVTTEEAPTTVQAPKVETEMKSQEDLPSEKVA
  NCTC8325        QTTTNNVNTIDETQSYSATSTEQPSQSTQVTTEEAPKTVQAPKVET---SRVDLPSEKVA
  Newman          QTTTNNVNTIDETQSYSATSTEQPSQSTQVTTEEAPKTVQAPKVET---SRVDLPSEKVA
  USA300_FPR3757  QTTTNNVNTIDETQSYSATSTEQPSQSTQVTTEEAPKTVQAPKVET---SRVDLPSEKVA
                  *************************:**********.*********   *: ********
  
  COL             DKETTGTQVDIAQPSNVSEIKPRMKRSTDVTAVAEKEVVEETKATGTDVTNKVEVEEGSE
  N315            DKETTGTQVDIAQPSNVSEIKPRMKRSADVTAVSEKEVAEEAKATGTDVTNKVEVTE-SS
  NCTC8325        DKETTGTQVDIAQPSNVSEIKPRMKRSTDVTAVAEKEVVEETKATGTDVTNKVEVEEGSE
  Newman          DKETTGTQVDIAQPSNVSEIKPRMKRSTDVTAVAEKEVVEETKATGTDVTNKVEVEEGSE
  USA300_FPR3757  DKETTGTQVDIAQPSNVSEIKPRMKRSTDVTAVAEKEVVEETKATGTDVTNKVEVEEGSE
                  ***************************:*****:****.**:************* * *.
  
  COL             IVGHKQDTNVVNPHNAERVTLKYKWKFGEGIKAGDYFDFTLSDNVETHGISTLRKVPEIK
  N315            LEGHNKDSNIVNPHNAQRVTLKYKWKFGEGIKAGDYFDFTLSDNVETHGISTLRKVPEIK
  NCTC8325        IVGHKQDTNVVNPHNAERVTLKYKWKFGEGIKAGDYFDFTLSDNVETHGISTLRKVPEIK
  Newman          IVGHKQDTNVVNPHNAERVTLKYKWKFGEGIKAGDYFDFTLSDNVETHGISTLRKVPEIK
  USA300_FPR3757  IVGHKQDTNVVNPHNAERVTLKYKWKFGEGIKAGDYFDFTLSDNVETHGISTLRKVPEIK
                  : **::*:*:******:*******************************************
  
  COL             -STDGQVMATGEIIGERKVRYTFKEYVQEKKDLTAELSLNLFIDPTTVTQKGNQNVEVKL
  N315            SSTEDKVMANGQVINERTIRYTFTDYINNKKDLTAELNLNLFIDPTTVTKQGSQKVEVTL
  NCTC8325        -STDGQVMATGEIIGERKVRYTFKEYVQEKKDLTAELSLNLFIDPTTVTQKGNQNVEVKL
  Newman          -STDGQVMATGEIIGERKVRYTFKEYVQEKKDLTAELSLNLFIDPTTVTQKGNQNVEVKL
  USA300_FPR3757  -STDGQVMATGEIIGERKVRYTFKEYVQEKKDLTAELSLNLFIDPTTVTQKGNQNVEVKL
                   **:.:***.*::*.**.:****.:*:::********.***********::*.*:***.*
  
  COL             GETTVSKIFNIQYLGGVRDNWGVTANGRIDTLNKVDGKFSHFAYMKPNNQSLSSVTVTGQ
  N315            GQNKVSKEFDIKYLDGVKDRMGVTVNGRIDTLNKEEGKFSHFAYVKPNNQSLTSVTVTGQ
  NCTC8325        GETTVSKIFNIQYLGGVRDNWGVTANGRIDTLNKVDGKFSHFAYMKPNNQSLSSVTVTGQ
  Newman          GETTVSKIFNIQYLGGVRDNWGVTANGRIDTLNKVDGKFSHFAYMKPNNQSLSSVTVTGQ
  USA300_FPR3757  GETTVSKIFNIQYLGGVRDNWGVTANGRIDTLNKVDGKFSHFAYMKPNNQSLSSVTVTGQ
                  *:..*** *:*:**.**:*. ***.********* :********:*******:*******
  
  COL             VTKGNKPGVNNPTVKVYKHIGSDDLAESVYAKLDDVSKFEDVTDNMSLDFDTNGGYSLNF
  N315            VTSGYKQSANNPTVKVYKHIGSDELAESVYAKLDDTSKFEDVTEKVNLSYTSNGGYTLNL
  NCTC8325        VTKGNKPGVNNPTVKVYKHIGSDDLAESVYAKLDDVSKFEDVTDNMSLDFDTNGGYSLNF
  Newman          VTKGNKPGVNNPTVKVYKHIGSDDLAESVYAKLDDVSKFEDVTDNMSLDFDTNGGYSLNF
  USA300_FPR3757  VTKGNKPGVNNPTVKVYKHIGSDDLAESVYAKLDDVSKFEDVTDNMSLDFDTNGGYSLNF
                  **.* * ..**************:***********.*******:::.*.: :****:**:
  
  COL             NNLDQSKNYVIKYEGYYDSNASNLEFQTHLFGYYNY--------YYTSNLTWKNGVAFYS
  N315            GDLDNSKDYVIKYEGEYDQNAKDLNFRTHLSGYHKYYPYYPYYPYYPVQLTWNNGVAFYS
  NCTC8325        NNLDQSKNYVIKYEGYYDSNASNLEFQTHLFGYYNY--------YYTSNLTWKNGVAFYS
  Newman          NNLDQSKNYVIKYEGYYDSNASNLEFQTHLFGYYNY--------YYTSNLTWKNGVAFYS
  USA300_FPR3757  NNLDQSKNYVIKYEGYYDSNASNLEFQTHLFGYYNY--------YYTSNLTWKNGVAFYS
                  .:**:**:******* **.**.:*:*:*** **::*        **. :***:*******
  
  COL             NNAQGDGKDKLKEPIIEHSTPIELEFKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEG
  N315            NNAKGDGKDKPNDPIIEKSEPIDLDIKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEG
  NCTC8325        NNAQGDGKDKLKEPIIEHSTPIELEFKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEG
  Newman          NNAQGDGKDKLKEPIIEHSTPIELEFKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEG
  USA300_FPR3757  NNAQGDGKDKLKEPIIEHSTPIELEFKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEG
                  ***:****** ::****:* **:*::**********************************
  
  COL             AEGHAEGTIETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDED
  N315            AEGHAEGIIETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDEE
  NCTC8325        AEGHAEGTIETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDED
  Newman          AEGHAEGTIETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDED
  USA300_FPR3757  AEGHAEGTIETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDED
                  ******* ***************************************************:
  
  COL             STKGIVTGAVSDHTTIEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSG
  N315            STKGIVTGAVSDHTTVEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSG
  NCTC8325        STKGIVTGAVSDHTTIEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSG
  Newman          STKGIVTGAVSDHTTIEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSG
  USA300_FPR3757  STKGIVTGAVSDHTTIEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSG
                  ***************:********************************************
  
  COL             LGTENGHGNYGVIEEIEENSHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVD
  N315            LGTENGHGNYGVIDEIEENSHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVD
  NCTC8325        LGTENGHGNYGVIEEIEENSHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVD
  Newman          LGTENGHGNYGVIEEIEENSHVDIKSELG-------------------------------
  USA300_FPR3757  LGTENGHGNYGVIEEIEENSHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVD
                  *************:***************                               
  
  COL             IDFDSVPQIHGQNNGNQSFEEDTEKDKPKYEQGGNIIDIDFDSVPHIHGFNKHTEIIEED
  N315            IDFDSVPQIHGQNNGNQSFEEDTEEDKPKYEQGGNIIDIDFDSVPQIHGFNKHNEIIEED
  NCTC8325        IDFDSVPQIHGQNNGNQSFEEDTEKDKPKYEQGGNIIDIDFDSVPHIHGFNKHTEIIEED
  Newman          ------------------------------------------------------------
  USA300_FPR3757  IDFDSVPQIHGQNNGNQSFEEDTEKDKPKYEQGGNIIDIDFDSVPHIHGFNKHTEIIEED
                                                                              
  
  COL             TNKDKPNYQFGGHNSVDFEEDTLPQVSGHNEGQQTIEEDTTPPIVP----------PTPP
  N315            TNKDKPNYQFGGHNSVDFEEDTLPKVSGQNEGQQTIEEDTTPPTPPTPEVPSEPETPTPP
  NCTC8325        TNKDKPNYQFGGHNSVDFEEDTLPQVSGHNEGQQTIEEDTTPPIVP----------PTPP
  Newman          ------------------------------------------------------------
  USA300_FPR3757  TNKDKPNYQFGGHNSVDFEEDTLPQVSGHNEGQQTIEEDTTPPIVP----------PTPP
                                                                              
  
  COL             TPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPTEPGKPIPPAKEEPKKPSKPVEQGKVV
  N315            TPEVPSEPGEPTPPKPEVPSEPETPVPPTPEVPSEPGKPVPPAKEEPKKPSKPVEQGKVV
  NCTC8325        TPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPTEPGKPIPPAKEEPKKPSKPVEQGKVV
  Newman          ------------------------------------------------------------
  USA300_FPR3757  TPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPTEPGKPIPPAKEEPKKPSKPVEQGKVV
                                                                              
  
  COL             TPVIEINEKVKAVVPTKKAQSKKSELPETGGEESTNNGMLFGGLFSILGLALLRRNKKNH
  N315            TPVIEINEKVKAVAPTKQKQSKKSELPETGGEESTNKGMLFGGLFSILGLVLLRRNKKNN
  NCTC8325        TPVIEINEKVKAVVPTKKAQSKKSELPETGGEESTNNGMLFGGLFSILGLALLRRNKKNH
  Newman          ------------------------------------------------------------
  USA300_FPR3757  TPVIEINEKVKAVVPTKKAQSKKSELPETGGEESTNNGMLFGGLFSILGLALLRRNKKNH
                                                                              
  
  COL             KA
  N315            KA
  NCTC8325        KA
  Newman          --
  USA300_FPR3757  KA