PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006110000
• symbol^?: sarU
• synonym:
• description^?: transcriptional regulator

  descriptions from strain specific annotations:

  • transcriptional regulator
  • accessory regulator U
  • HTH-type transcriptional regulator SarU
  • Accessory regulator A family protein
  • accessory regulator A-like protein
  • marR family protein
  • putative staphylococcal accessory regulator
  • SarA family transcriptional regulator
  • staphylococcal accessory regulator A, SarH1
  • transcriptional regulator SarU
  • Transcriptional regulator SarU (Staphylococcal accessory regulator U)
• strand^?: +
• coordinates^?: 6164893..6165636
• synteny block^?: BlockID0048440
• occurrence^?: in 70% of 33 strains

⊟Orthologs

COL:
SACOL2507 (sarU)
N315:
SA2287 (sarH2)
NCTC8325:
SAOUHSC_02800
Newman:
NWMN_2394 (sarU)
USA300_FPR3757:
SAUSA300_2438 (sarU)
04-02981:
SA2981_2435 (sarU)
08BA02176:
—
11819-97:
MS7_2502 (sarU)
6850:
—
71193:
—
ECT-R 2:
ECTR2_2352
ED133:
—
ED98:
SAAV_2564 (sarU)
HO 5096 0412:
SAEMRSA15_23970
JH1:
SaurJH1_2575
JH9:
SaurJH9_2523
JKD6008:
SAA6008_02534 (sarH1)
JKD6159:
SAA6159_02393 (sarH1)
LGA251:
—
M013:
M013TW_2465
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS2385
Mu3:
SAHV_2483 (sarH2)
Mu50:
SAV2499 (sarH2)
MW2:
MW2418 (sarH2)
RF122:
—
ST398:
—
T0131:
SAT0131_02697
TCH60:
—
TW20:
SATW20_26190 (sarU)
USA300_TCH1516:
USA300HOU_2488 (sarU)
VC40:
SAVC_11365

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MDYQTFEKVNKFINVKAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDI
  N315            MDYQTFEKVNKFINVEAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDI
  NCTC8325        MDYQTFEKVNKFINVEAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDI
  Newman          MDYQTFEKVNKFINVKAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDI
  USA300_FPR3757  MDYQTFEKVNKFINVEAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDI
                  ***************:********************************************
  
  COL             LYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNK
  N315            LYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNK
  NCTC8325        LYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNK
  Newman          LYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNK
  USA300_FPR3757  LYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNK
                  ************************************************************
  
  COL             ERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKD
  N315            ERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKD
  NCTC8325        ERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKD
  Newman          ERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKD
  USA300_FPR3757  ERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKD
                  ************************************************************
  
  COL             LFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
  N315            LFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
  NCTC8325        LFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
  Newman          LFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKIL
  USA300_FPR3757  LFESIRFMYPQIVRSVNRLNNKGMLIKERSHADERIVLIKINKIQYNTIKSIFTDTSKIL
                  ****************************** *****************************
  
  COL             KPRKFFF
  N315            KPRKFFF
  NCTC8325        KPRKFFF
  Newman          KPRKFFF
  USA300_FPR3757  KPRKFFF
                  *******