PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006167000
• symbol^?: —
• synonym:
• description^?: glyoxalase

  descriptions from strain specific annotations:

  • glyoxalase
  • bleomycin resistance protein
  • glyoxalase family protein
  • ring-cleavage extradiol dioxygenase, putative
  • VOC family protein
  • glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
  • glyoxalase/bleomycin resistance protein/dioxygenase
  • pseudogene
• strand^?: +
• coordinates^?: 6238611..6239417
• synteny block^?: BlockID0048920
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2533
N315:
SA2310
NCTC8325:
SAOUHSC_02828
Newman:
NWMN_2420
USA300_FPR3757:
SAUSA300_2461
04-02981:
SA2981_2458
08BA02176:
C248_2580
11819-97:
MS7_2528
6850:
RSAU_002363
71193:
ST398NM01_2574
ECT-R 2:
ECTR2_2374
ED133:
SAOV_2566
ED98:
SAAV_2587
HO 5096 0412:
SAEMRSA15_24200
JH1:
SaurJH1_2597
JH9:
SaurJH9_2545
JKD6008:
SAA6008_02560
JKD6159:
SAA6159_02418
LGA251:
SARLGA251_22970
M013:
M013TW_2494
MRSA252:
SAR2602
MSHR1132:
SAMSHR1132_23430
MSSA476:
SAS2407
Mu3:
SAHV_2506
Mu50:
SAV2522
MW2:
MW2442
RF122:
SAB2396
ST398:
SAPIG2574
T0131:
SAT0131_02724 (sasA)
TCH60:
HMPREF0772_10671
TW20:
SATW20_26430
USA300_TCH1516:
USA300HOU_2511
VC40:
SAVC_11485

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MAFHDKTATQVTNIVLNVRDLDLMTTFYKNILGLSVKSSDDNTTVLSVGTGGHTLTLHLL
  N315            MAFHDKTATQVTNIELNVRDLDLMTTFYKNILGLSVKSSDDNTTVLSVGTGGHTLTLHLL
  NCTC8325        MAFHDKTATQVTNIVLNVRDLDLMTTFYKNILGLSVKSSDDNTTVLSVGTGGHTLTLHLL
  Newman          MAFHDKTATQVTNIVLNVRDLDLMTTFYKNILGLSVKSSDDNTTVLSVGTGGHTLTLHLL
  USA300_FPR3757  MAFHDKTATQVTNIVLNVRDLDLMTTFYKNILGLSVKSSDDNTTVLSVGTGGHTLTLHLL
                  ************** *********************************************
  
  COL             EDGRQTSPREAGLFHIAFLLPTTEDLANFLYFVAQKNMGIGAGDHLVSEALYFNDPEGNG
  N315            EDGRQTSPREAGLFHIAFLLPTTEDLANFLYFVAQKNMGIGAGDHLVSEALYFNDPEGNG
  NCTC8325        EDGRQTSPREAGLFHIAFLLPTTEDLANFLYFVAQKNMGIGAGDHLVSEALYFNDPEGNG
  Newman          EDGRQTSPREAGLFHIAFLLPTTEDLANFLYFVAQKNMGIGAGDHLVSEALYFNDPEGNG
  USA300_FPR3757  EDGRQTSPREAGLFHIAFLLPTTEDLANFLYFVAQKNMGIGAGDHLVSEALYFNDPEGNG
                  ************************************************************
  
  COL             IEVYRDRPSSSWEWQNGKVKMDTLEVDSQTLLTHRTDEGWQGMPAKGMIGHLHLKTHDLD
  N315            IEVYRDRPSSSWEWQNGKVKMDTLEVDSQTLLTHRTDEGWQGMPAKGMIGHLHLKTHDLD
  NCTC8325        IEVYRDRPSSSWEWQNGKVKMDTLEVDSQTLLTHRTDEGWQGMPAKGMIGHLHLKTHDLD
  Newman          IEVYRDRPSSSWEWQNGKVKMDTLEVDSQTLLTHRTDEGWQGMPAKGMIGHLHLKTHDLD
  USA300_FPR3757  IEVYRDRPSSSWEWQNGKVKMDTLEVDSQTLLTHRTDEGWQGMPAKGMIGHLHLKTHDLD
                  ************************************************************
  
  COL             AAYQCYIEQLGFQHVSDFPRALFMSTNHYHHHIAANTWQSNQARQNNSQSYGLTHVDIYQ
  N315            AAYQCYIEQLGFQHVSDFPRALFMSTNHYHHHIAANTWQSNQARQNNAQSYGLTHVDIYQ
  NCTC8325        AAYQCYIEQLGFQHVSDFPRALFMSTNHYHHHIAANTWQSNQARQNNSQSYGLTHVDIYQ
  Newman          AAYQCYIEQLGFQHVSDFPRALFMSTNHYHHHIAANTWQSNQARQNNSQSYGLTHVDIYQ
  USA300_FPR3757  AAYQCYIEQLGFQHVSDFPRALFMSTNHYHHHIAANTWQSNQARQNNSQSYGLTHVDIYQ
                  ***********************************************:************
  
  COL             PDASTHTFTAPEGFDITVHSNTDLVPEK
  N315            PDASTHTFTAPEGFDITVHSNTDLVPEK
  NCTC8325        PDASTHTFTAPEGFDITVHSNTDLVPEK
  Newman          PDASTHTFTAPEGFDITVHSNTDLVPEK
  USA300_FPR3757  PDASTHTFTAPEGFDITVHSNTDLVPEK
                  ****************************