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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006174000
- symbol?: —
- synonym:
- description?: haloacid dehalogenase
- haloacid dehalogenase
- HAD superfamily hydrolase
- HAD family hydrolase
- haloacid dehalogenase-like family hydrolase
- hydrolase
- cof family hydrolase
- cof-like hydrolase family protein
- HAD family phosphatase
- HAD hydrolase
- Hydrolase (HAD superfamily)
- putative haloacid dehalogenase-like hydrolase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6242602..6243402
- synteny block?: BlockID0048990
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2461
08BA02176:
C248_2583
11819-97:
MS7_2531
6850:
RSAU_002366
71193:
ST398NM01_2577
ECT-R 2:
ECTR2_2377
ED133:
SAOV_2569c
ED98:
SAAV_2590
HO 5096 0412:
SAEMRSA15_24240
JH1:
SaurJH1_2600
JH9:
SaurJH9_2548
JKD6008:
SAA6008_02563
JKD6159:
SAA6159_02421
LGA251:
SARLGA251_23000
M013:
M013TW_2497
MRSA252:
SAR2607
MSHR1132:
SAMSHR1132_23460
MSSA476:
SAS2411
Mu3:
SAHV_2509
Mu50:
SAV2525
MW2:
MW2445
RF122:
SAB2399c
ST398:
SAPIG2577
T0131:
SAT0131_02728
TCH60:
HMPREF0772_10665 (supH)
TW20:
SATW20_26460
USA300_TCH1516:
USA300HOU_2514
VC40:
SAVC_11500
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVKAIAVDMDGTFLDSKKTYDKLRFEAIFTELRNRDITFIAASGNQYAKLKSIFGDRDMY
N315 MVKAIAVDMDGTFLDSKKTYDKPRFEAIFTELRNRDITFIAASGNQYAKLKSIFGDRDMY
NCTC8325 MVKAIAVDMDGTFLDSKKTYDKLRFEAIFTELRNRDITFIAASGNQYAKLKSIFGDRDMY
Newman MVKAIAVDMDGTFLDSKKTYDKLRFEAIFTELRNRDITFIAASGNQYAKLKSIFGDRDMY
USA300_FPR3757 MVKAIAVDMDGTFLDSKKTYDKLRFEAIFTELRNRDITFIAASGNQYAKLKSIFGDRDMY
********************** *************************************
COL FISENGAVIYNGNELYNYKSFNRQVFQQVVDYLNMKQSIDQLVICGLKSAYILKHTSEAF
N315 FISENGAVIYKGNELYNYKSFNRQVFQQVVDYLNMNQSIDQLVICGLKSAYILKHTSEAF
NCTC8325 FISENGAVIYNGNELYNYKSFNRQVFQQVVDYLNMKQSIDQLVICGLKSAYILKHTSEAF
Newman FISENGAVIYNGNELYNYKSFNRQVFQQVVDYLNMKQSIDQLVICGLKSAYILKHTSEAF
USA300_FPR3757 FISENGAVIYNGNELYNYKSFNRQVFQQVVDYLNMKQSIDQLVICGLKSAYILKHTSEAF
**********:************************:************************
COL KEDTRFYYHQLKEIDSLQQLPEDDYVKIAFNINRETHPNVDEEVATQFSNDIKLVSSGND
N315 KEDTRFYYHQLKEIDSLQQLPEDDYVKIAFNINRETHPNVDEEVATQFSNDIKLVSSGHD
NCTC8325 KEDTRFYYHQLKEIDSLQQLPEDDYVKIAFNINRETHPNVDEEVATQFSNDIKLVSSGHD
Newman KEDTRFYYHQLKEIDSLQQLPEDDYVKIAFNINRETHPNVDEEVATQFSNDIKLVSSGND
USA300_FPR3757 KEDTRFYYHQLKEIDSLQQLPEDDYVKIAFNINRETHPNVDEEVATQFSNDIKLVSSGND
**********************************************************:*
COL SIDIIMPNMTKGQALKRLLDKWEMSPSELMAFGDANNDKDMLAFAKHSYVMENSHDEELF
N315 SIDIIMPNMTKGQALKRLLDKWEMSPSELMAFGDANNDKDMLAFAKHSYVMENSHDEELF
NCTC8325 SIDIIMPNMTKGQALKRLLDKWEMSPSELMAFGDANNDKDMLAFAKHSYVMENSHDEELF
Newman SIDIIMPNMTKGQALKRLLDKWEMSPSELMAFGDANNDKDMLAFAKHSYVMENSHDEELF
USA300_FPR3757 SIDIIMPNMTKGQALKRLLDKWEMSPSELMAFGDANNDKDMLAFAKHSYVMENSHDEELF
************************************************************
COL NIASAVAPSNDKQGVLTIIEQEVLKK
N315 NIASAVAPSNDKQGVLTIIEQEVLNK
NCTC8325 NIASAVAPSNDKQGVLTIIEQEVLKK
Newman NIASAVAPSNDKQGVLTIIEQEVLKK
USA300_FPR3757 NIASAVAPSNDKQGVLTIIEQEVLKK
************************:*