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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006217000
- symbol?: rocA
- synonym:
- description?: 1-pyrroline-5-carboxylate dehydrogenase
- 1-pyrroline-5-carboxylate dehydrogenase
- L-glutamate gamma-semialdehyde dehydrogenase
- Delta-1-pyrroline-5-carboxylate dehydrogenase
- aldehyde dehydrogenase family protein
- delta-1-pyrroline-5-carboxylate dehydrogenase, putative
- putative delta-1-pyrroline-5-carboxylate dehydrogenase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6278675..6280219
- synteny block?: BlockID0049410
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2491 (rocA)
08BA02176:
C248_2612
11819-97:
MS7_2561 (pruA)
6850:
RSAU_002395 (rocA)
71193:
ST398NM01_2605
ECT-R 2:
ECTR2_2407 (pruA)
ED133:
SAOV_2599c
ED98:
SAAV_2620
HO 5096 0412:
SAEMRSA15_24570
JH1:
SaurJH1_2630
JH9:
SaurJH9_2576
JKD6008:
SAA6008_02593 (rocA)
JKD6159:
SAA6159_02450 (rocA)
LGA251:
SARLGA251_23290
M013:
M013TW_2528
MRSA252:
SAR2634
MSHR1132:
SAMSHR1132_23750
MSSA476:
SAS2440
Mu3:
SAHV_2538 (rocA)
Mu50:
SAV2554 (rocA)
MW2:
MW2475 (rocA)
RF122:
SAB2428c
ST398:
SAPIG2605
T0131:
SAT0131_02765 (glnA)
TCH60:
HMPREF0772_10636 (rocA)
TW20:
SATW20_26760
USA300_TCH1516:
USA300HOU_2549
VC40:
SAVC_11650
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVVEFKNEPGYDFSVQENVDMFKKALKDVEKELGQDIPLVINGEKIFKDDKIKSINPADT
N315 MVVEFKNEPGYDFSVQENVDMFKKALKDVEKELGQDIPLVINGEKIFKDDKIKSINPADT
NCTC8325 MVVEFKNEPGYDFSVQENVDMFKKALKDVEKELGQDIPLVINGEKIFKDDKIKSINPADT
Newman MVVEFKNEPGYDFSVQENVDMFKKALKDVEKELGQDIPLVINGEKIFKDDKIKSINPADT
USA300_FPR3757 MVVEFKNEPGYDFSVQENVDMFKKALKDVEKELGQDIPLVINGEKIFKDDKIKSINPADT
************************************************************
COL SQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMV
N315 SQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMV
NCTC8325 SQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMV
Newman SQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMV
USA300_FPR3757 SQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMV
************************************************************
COL YEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPP
N315 YEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPP
NCTC8325 YEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPP
Newman YEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPP
USA300_FPR3757 YEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPP
************************************************************
COL WNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKE
N315 WNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKE
NCTC8325 WNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKE
Newman WNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKE
USA300_FPR3757 WNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKE
************************************************************
COL IGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENID
N315 IGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENID
NCTC8325 IGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENID
Newman IGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENID
USA300_FPR3757 IGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENID
************************************************************
COL TDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDNTYMGP
N315 TDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDNTYMGP
NCTC8325 TDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDNTYMGP
Newman TDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDNTYMGP
USA300_FPR3757 TDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVDNTYMGP
************************************************************
COL VINKKQFDKIKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPV
N315 VINKKQFDKIKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPV
NCTC8325 VINKKQFDKIKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPV
Newman VINKKQFDKIKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPV
USA300_FPR3757 VINKKQFDKIKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPV
************************************************************
COL VGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGY
N315 VGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGY
NCTC8325 VGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGY
Newman VGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGY
USA300_FPR3757 VGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGY
************************************************************
COL HPFGGFKMSGTDAKTGSPDYLLHFLEQKVVSEMF
N315 HPFGGFKMSGTDAKTGSPDYLLHFLEQKVVSEMF
NCTC8325 HPFGGFKMSGTDAKTGSPDYLLHFLEQKVVSEMF
Newman HPFGGFKMSGTDAKTGSPDYLLHFLEQKVVSEMF
USA300_FPR3757 HPFGGFKMSGTDAKTGSPDYLLHFLEQKVVSEMF
**********************************