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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006354000
- symbol?: —
- synonym:
- description?: MarR family transcriptional regulator
- MarR family transcriptional regulator
- putative transcriptional regulator
- transcriptional regulator
- transcriptional regulator, MarR family
- winged helix-turn-helix transcriptional regulator
- HTH domain protein
- MarR family regulatory protein
- MW2549 protein
- putative regulatory protein
- regulatory protein
- transcriptional regulator, putative
- transcriptional regulator SlyA
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6388729..6389184
- synteny block?: BlockID0050640
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2567
08BA02176:
C248_2696
11819-97:
MS7_2633
6850:
RSAU_002471
71193:
ST398NM01_2677
ECT-R 2:
ECTR2_2482
ED133:
SAOV_2677c
ED98:
SAAV_2697
HO 5096 0412:
SAEMRSA15_25330
JH1:
SaurJH1_2708
JH9:
SaurJH9_2652
JKD6008:
SAA6008_02687 (slyA)
JKD6159:
SAA6159_02524 (slyA)
LGA251:
SARLGA251_24000
M013:
—
MRSA252:
SAR2707
MSHR1132:
SAMSHR1132_24520
MSSA476:
SAS2514
Mu3:
SAHV_2612
Mu50:
SAV2628
MW2:
MW2549
RF122:
SAB2503c
ST398:
SAPIG2677
T0131:
SAT0131_02891
TCH60:
HMPREF0772_10561
TW20:
SATW20_27660
USA300_TCH1516:
USA300HOU_2628
VC40:
SAVC_12020
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ------MSTNKNDYEHMLFYFAYKTFITTADEIIEKYGMSRQHHRFLFFINKLPGITIKS
N315 MKGVIIMSTNKNDYEHMLFYFAYKTFITTADEIIEKYGMSRQHHRFLFFINKLPGITIKS
NCTC8325 ------MSTNKNDYEHMLFYFAYKTFITTADEIIEKYGMSRQHHRFLFFINKLPGITIKS
Newman ------MSTNKNDYEHMLFYFAYKTFITTADEIIEKYGMSRQHHRFLFFINKLPGITIKS
USA300_FPR3757 ------MSTNKNDYEHMLFYFAYKTFITTADEIIEKYGMSRQHHRFLFFINKLPGITIKS
******************************************************
COL LLEILEISKQGSHATLQKLKEQGLIIEKVLETDRRVKKLYSTDKGDQLIAELNKAQDELL
N315 LLEILEISKQGSHATLQKLKEQGLIIEKVLETDRRVKKLYSTDKGDQLIAELNKAQDELL
NCTC8325 LLEILEISKQGSHATLQKLKEQGLIIEKVLETDRRVKKLYSTDKGDQLIAELNKAQDELL
Newman LLEILEISKQGSHATLQKLKEQGLIIEKVLETDRRVKKLYSTDKGDQLIAELNKAQDELL
USA300_FPR3757 LLEILEISKQGSHATLQKLKEQGLIIEKVLETDRRVKKLYSTDKGDQLIAELNKAQDELL
************************************************************
COL QNIYQQVGSDWYDVMEALAKGRPGFDFIKHLKDEKES
N315 QNIYQQVGSDWYDVMEALAKGRPGFDFIKHLKDEKES
NCTC8325 QNIYQQVGSDWYDVMEALAKGRPGFDFIKHLKDEKES
Newman QNIYQQVGSDWYDVMEALAKGRPGFDFIKHLKDEKES
USA300_FPR3757 QNIYQQVGSDWYDVMEALAKGRPGFDFIKHLKDEKES
*************************************