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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006385000
- symbol?: asp2
- synonym:
- description?: accessory Sec system protein Asp2
- accessory Sec system protein Asp2
- accessory secretory protein Asp2
- accessory Sec system asp2
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6427994..6429562
- synteny block?: BlockID0050930
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2590 (asp2)
08BA02176:
C248_2719
11819-97:
MS7_2656 (asp2)
6850:
RSAU_002494 (asp2)
71193:
ST398NM01_2701
ECT-R 2:
ECTR2_2505
ED133:
SAOV_2702c
ED98:
SAAV_2721
HO 5096 0412:
SAEMRSA15_25560
JH1:
SaurJH1_2731
JH9:
SaurJH9_2675
JKD6008:
SAA6008_02710 (asp2)
JKD6159:
SAA6159_02547 (asp2)
LGA251:
SARLGA251_24230
M013:
M013TW_2632
MRSA252:
SAR2730
MSHR1132:
SAMSHR1132_24750
MSSA476:
SAS2537
Mu3:
SAHV_2635
Mu50:
SAV2651
MW2:
MW2572
RF122:
SAB2526c
ST398:
SAPIG2701
T0131:
SAT0131_02920
TCH60:
HMPREF0772_10536 (asp2)
TW20:
SATW20_27890
USA300_TCH1516:
USA300HOU_2651
VC40:
SAVC_12135
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYI
N315 MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYI
NCTC8325 MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYI
Newman MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYI
USA300_FPR3757 MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYI
************************************************************
COL QAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEA
N315 QAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEA
NCTC8325 QAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEA
Newman QAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEA
USA300_FPR3757 QAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEA
************************************************************
COL VSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFRKEFKPIASWQNNLVYDKDK
N315 VSFSGQYGDKVSPKLALVHPNFKVDVVYQGNSELTLSGEFGKEFKPIASWQNNLVYDKDK
NCTC8325 VSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFGKEFKPIASWQNNLVYDKDK
Newman VSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFRKEFKPIASWQNNLVYDKDK
USA300_FPR3757 VSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFGKEFKPIASWQNNLVYDKDK
*********************** **************** *******************
COL VIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIVLTDDMLDSPLEIPAKPFDAYISVT
N315 VIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIILTDDMLDSPLEIPAKPFDAYISVT
NCTC8325 VIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIVLTDDMLDSPLEIPAKPFDAYISVT
Newman VIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIVLTDDMLDSPLEIPAKPFDAYISVT
USA300_FPR3757 VIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIVLTDDMLDSPLEIPAKPFDAYISVT
***********************************:************************
COL VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSG
N315 VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSG
NCTC8325 VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSG
Newman VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSG
USA300_FPR3757 VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSG
************************************************************
COL YRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYIGSSEYEQGIINVIDETLEKLNFKSH
N315 YRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYIGSSEYEQGIINVIDETLEKLNFKSH
NCTC8325 YRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYIGSSEYEQGIINVIDETLEKLNFKSH
Newman YRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYIGSSEYEQGIINVIDETLEKLNFKSH
USA300_FPR3757 YRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYIGSSEYEQGIINVIDETLEKLNFKSH
************************************************************
COL ELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEHMRLLRPEEFGTALDVLVSN
N315 ELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEHMRLLRPEEFGTALDVLVSN
NCTC8325 ELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEHMRLLRPEEFGTALDVLVSN
Newman ELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEHMRLLRPEEFGTALDVLVSN
USA300_FPR3757 ELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEHMRLLRPEEFGTALDVLVSN
************************************************************
COL EGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM
N315 EGDTSQASIKALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM
NCTC8325 EGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM
Newman EGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM
USA300_FPR3757 EGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM
*********:**************************************************
COL NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI
N315 NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI
NCTC8325 NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI
Newman NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI
USA300_FPR3757 NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI
******************************************