PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006431000
• symbol^?: hisB
• synonym:
• description^?: imidazoleglycerol-phosphate dehydratase

  descriptions from strain specific annotations:

  • imidazoleglycerol-phosphate dehydratase
  • imidazole glycerol phosphate dehydratase HisB
  • putative imidazoleglycerol-phosphate dehydratase
  • histidine biosynthesis bifunctional protein HisB (histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase)
  • imidazoleglycerol-phosphate dehydratase (IGPD)
  • imidazoleglycerol-phosphate dehydratase family protein
• strand^?: -
• coordinates^?: 6473453..6474031
• synteny block^?: BlockID0051380
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2700 (hisB)
N315:
SA2468 (hisB)
NCTC8325:
SAOUHSC_03011 (hisB)
Newman:
NWMN_2574 (hisB)
USA300_FPR3757:
SAUSA300_2609 (hisB)
04-02981:
SA2981_2616 (hisB)
08BA02176:
C248_2745 (hisB)
11819-97:
MS7_2681
6850:
RSAU_002521 (hisB)
71193:
ST398NM01_2727
ECT-R 2:
ECTR2_2529
ED133:
SAOV_2727c
ED98:
SAAV_2749 (hisB)
HO 5096 0412:
SAEMRSA15_25820 (hisB)
JH1:
SaurJH1_2757 (hisB)
JH9:
SaurJH9_2700 (hisB)
JKD6008:
SAA6008_02735 (hisB)
JKD6159:
SAA6159_02573 (hisB)
LGA251:
SARLGA251_24490 (hisB)
M013:
M013TW_2659
MRSA252:
SAR2758 (hisB)
MSHR1132:
SAMSHR1132_25030
MSSA476:
SAS2561 (hisB)
Mu3:
SAHV_2660 (hisB)
Mu50:
SAV2676 (hisB)
MW2:
MW2595 (hisB)
RF122:
SAB2552c (hisB)
ST398:
SAPIG2727 (hisB)
T0131:
SAT0131_02955 (thyA)
TCH60:
HMPREF0772_10510 (hisB)
TW20:
SATW20_28130 (hisB)
USA300_TCH1516:
USA300HOU_2677 (hisB)
VC40:
SAVC_12255 (hisB)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVD
  N315            MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVD
  NCTC8325        MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVD
  Newman          MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVD
  USA300_FPR3757  MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVD
                  ************************************************************
  
  COL             DHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLS
  N315            DHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLS
  NCTC8325        DHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLS
  Newman          DHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLS
  USA300_FPR3757  DHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLS
                  ************************************************************
  
  COL             KEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATD
  N315            KEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATD
  NCTC8325        KEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATD
  Newman          KEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATD
  USA300_FPR3757  KEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATD
                  ************************************************************
  
  COL             DQRVPSSKGVIE
  N315            DQRVPSSKGVIE
  NCTC8325        DQRVPSSKGVIE
  Newman          DQRVPSSKGVIE
  USA300_FPR3757  DQRVPSSKGVIE
                  ************