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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006479000
- symbol?: cspB
- synonym:
- description?: cold-shock protein
- cold-shock protein
- cold shock protein cspB
- CSD family cold shock protein
- cold shock protein cspC
- cold-shock DNA-binding domain-containing protein
- cold shock protein, CSD family
- cold shock protein B
- Cold shock protein CspG
- cspD: cold shock domain-containing protein CspD
- DNA-binding cold-shock protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6516373..6516600
- synteny block?: BlockID0051860
- occurrence?: in 94% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2643 (cspG)
08BA02176:
C248_2770 (cspD)
11819-97:
MS7_2709 (cspC)
6850:
RSAU_002553 (cspB)
71193:
ST398NM01_2750
ECT-R 2:
ECTR2_2556
ED133:
SAOV_2747
ED98:
SAAV_2776
HO 5096 0412:
—
JH1:
SaurJH1_2784
JH9:
SaurJH9_2727
JKD6008:
SAA6008_02766
JKD6159:
SAA6159_02598
LGA251:
SARLGA251_24690 (cspB)
M013:
M013TW_2691
MRSA252:
SAR2790 (cspB)
MSHR1132:
SAMSHR1132_25320
MSSA476:
SAS2587
Mu3:
SAHV_2688 (cspB)
Mu50:
SAV2704 (cspB)
MW2:
MW2623 (cspB)
RF122:
SAB2581 (cspB)
ST398:
SAPIG2750
T0131:
SAT0131_02987
TCH60:
HMPREF0772_10478 (cspB)
TW20:
SATW20_28420 (cspB)
USA300_TCH1516:
—
VC40:
SAVC_12410
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---------MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEI
N315 ---------MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEI
NCTC8325 MQKHTEVFYMNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEI
Newman ---------MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEI
USA300_FPR3757 MQKHTEVFYMNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEI
***************************************************
COL TEGQRGDQAVNVQTV
N315 TEGQRGDQAVNVQTV
NCTC8325 TEGQRGDQAVNVQTV
Newman TEGQRGDQAVNVQTV
USA300_FPR3757 TEGQRGDQAVNVQTV
***************