PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006490000
• symbol^?: rnpA
• synonym:
• description^?: ribonuclease P

  descriptions from strain specific annotations:

  • ribonuclease P
  • ribonuclease P protein component
  • ribonuclease P, protein component
• strand^?: -
• coordinates^?: 6525580..6525927
• synteny block^?: BlockID0051970
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL2739 (rnpA)
N315:
SA2502 (rnpA)
NCTC8325:
SAOUHSC_03054 (rnpA)
Newman:
NWMN_2613 (rnpA)
USA300_FPR3757:
SAUSA300_2647 (rnpA)
04-02981:
SA2981_2652 (rnpA)
08BA02176:
C248_2778 (rnpA)
11819-97:
MS7_2717 (rnpA)
6850:
RSAU_002561 (rnpA)
71193:
ST398NM01_2758
ECT-R 2:
ECTR2_2564 (rnpA)
ED133:
—
ED98:
SAAV_2784 (rnpA)
HO 5096 0412:
SAEMRSA15_26110 (rnpA)
JH1:
SaurJH1_2792 (rnpA)
JH9:
SaurJH9_2735 (rnpA)
JKD6008:
SAA6008_02774 (rnpA)
JKD6159:
SAA6159_02606 (rnpA)
LGA251:
SARLGA251_24770 (rnpA)
M013:
M013TW_2699
MRSA252:
SAR2799 (rnpA)
MSHR1132:
SAMSHR1132_25400
MSSA476:
SAS2595 (rnpA)
Mu3:
SAHV_2697 (rnpA)
Mu50:
SAV2713 (rnpA)
MW2:
MW2631 (rnpA)
RF122:
SAB2589c (rnpA)
ST398:
SAPIG2758 (rnpA)
T0131:
SAT0131_02995 (nth)
TCH60:
HMPREF0772_10469 (rnpA)
TW20:
SATW20_28510 (rnpA)
USA300_TCH1516:
USA300HOU_2716 (rnpA)
VC40:
SAVC_12455 (rnpA)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ---MEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLR
  N315            ---MEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLR
  NCTC8325        -MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLR
  Newman          MMLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLR
  USA300_FPR3757  -MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLR
                     :********************************************************
  
  COL             NKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
  N315            NKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
  NCTC8325        NKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
  Newman          NKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
  USA300_FPR3757  NKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
                  **********************************************************