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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_0719 [new locus tag: SAUSA300_RS03870 ]
- pan locus tag?: SAUPAN002638000
- symbol: SAUSA300_0719
- pan gene symbol?: sstB
- synonym:
- product: iron compound ABC transporter permease
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_0719 [new locus tag: SAUSA300_RS03870 ]
- symbol: SAUSA300_0719
- product: iron compound ABC transporter permease
- replicon: chromosome
- strand: +
- coordinates: 798994..799950
- length: 957
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3914417 NCBI
- RefSeq: YP_493422 NCBI
- BioCyc: see SAUSA300_RS03870
- MicrobesOnline: 1292234 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901ATGCGCAACAATAATAAAAAAATAATGCTTTTAATTGCAGTAACGTTATTAATTAGTATG
CTGTACTTATTTGTAGGTATTGATTTTGAAATATTTGAATATCAATTTTCAAGTCGTTTA
AGAAAGTTCATATTAATTATTTTAGTAGGTGCTGCCATTGCAACTTCAGTGGTGATTTTT
CAAGCGATTACAAATAACCGTCTATTGACACCATCAATAATGGGGTTAGATGCAGTTTAT
TTATTTATCAAAGTATTGCCAGTCTTTTTATTTGGAATTCAATCGGTATGGGTTACTAAT
GTATATTTGAACTTTATATTAACACTTATAACGATGGTGTTATTCGCACTAATCCTATTC
CAAGGTATCTTTAAAATCGGACATTTTTCAATTTATTTTATCTTACTTATTGGTGTCCTT
TTAGGAACATTTTTTAGAAGCATAACAGGTTTTATTCAACTGATTATGGATCCTGAGTCA
TTTTTAGCAATACAAAGTAGTATGTTTGCTAATTTTAATGCTTCTAATTCGAATTTAGTT
ACTTTCTCAGCAGTGCTATTAGTAATCTTATTAGTCATTACAATTTTACTATTGCCTTAT
TTAGATGTATTGCTTTTAGGTCGTGCTGAAGCAATTAATCTTGGGATATCGTATGAAAAA
TTAACGCGAATTCTACTTGTAATAGTCTCAGTTTTAGTTTCTGTGTCAACTGCATTAGTA
GGACCAATTACATTTTTAGGTTTATTAACTGTAAATCTAGCGCATGAACTAATGAAGACG
TATGAACATAAGTATATTTTAATTGCGACAATTTGCTTGAGTTGGATTAGTTTATTTAGT
GCGCAATGGGTAGTTGAAAATGTGTTTGAAGCTACGACAGAAATGAGTATACTTATTGAT
TTGATTGGTGGAAGTTATTTCATTTATCTATTAGTTAGAAGGAGAAATGCGCAATGA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_0719 [new locus tag: SAUSA300_RS03870 ]
- symbol: SAUSA300_0719
- description: iron compound ABC transporter permease
- length: 318
- theoretical pI: 9.18406
- theoretical MW: 35777
- GRAVY: 1.17138
⊟Function[edit | edit source]
- TIGRFAM: proposed F420-0 ABC transporter, permease protein (TIGR03869; HMM-score: 45.3)
- ⊞TheSEED :
- Iron compound ABC uptake transporter permease protein
Iron acquisition and metabolism Iron acquisition and metabolism - no subcategory Heme, hemin uptake and utilization systems in GramPositives Iron compound ABC uptake transporter permease proteinand 1 more - ⊞PFAM: Membrane_trans (CL0142) FecCD; FecCD transport family (PF01032; HMM-score: 174.2)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MRNNNKKIMLLIAVTLLISMLYLFVGIDFEIFEYQFSSRLRKFILIILVGAAIATSVVIFQAITNNRLLTPSIMGLDAVYLFIKVLPVFLFGIQSVWVTNVYLNFILTLITMVLFALILFQGIFKIGHFSIYFILLIGVLLGTFFRSITGFIQLIMDPESFLAIQSSMFANFNASNSNLVTFSAVLLVILLVITILLLPYLDVLLLGRAEAINLGISYEKLTRILLVIVSVLVSVSTALVGPITFLGLLTVNLAHELMKTYEHKYILIATICLSWISLFSAQWVVENVFEATTEMSILIDLIGGSYFIYLLVRRRNAQ
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available