From AureoWiki
Jump to navigation Jump to search

NCBI: 10-JUN-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_0883 [new locus tag: SAUSA300_RS04760 ]
  • pan locus tag?: SAUPAN003124000
  • symbol: SAUSA300_0883
  • pan gene symbol?: —
  • synonym:
  • product: putative surface protein

eapH2: neutrophil elastase, cathepsin-G, and proteinase-3 inhibitor EapH2

Link to Protein Data Bank crystal structure: 8GDG

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SAUSA300_0883 [new locus tag: SAUSA300_RS04760 ]
  • symbol: SAUSA300_0883
  • product: putative surface protein
  • replicon: chromosome
  • strand: +
  • coordinates: 970111..970545
  • length: 435
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGAAATTAAAATCATTTATAACTGTAACTTTGGCACTGGGCATGATCGCAACGACTGGC
    GCTACTGTGGCAGGTAATGAGGTATCTGCAGCAGAAAAGGACAAACTACCGGCAACTCAA
    AAAGCTAAAGAAATGCAAAATGTTCCATATACAATTGCAGTAGATGGCATTATGGCTTTC
    AATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAAT
    AAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCA
    AAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAG
    AAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAAT
    GTAAAAACTAAATAA
    60
    120
    180
    240
    300
    360
    420
    435

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SAUSA300_0883 [new locus tag: SAUSA300_RS04760 ]
  • symbol: SAUSA300_0883
  • description: putative surface protein
  • length: 144
  • theoretical pI: 9.84615
  • theoretical MW: 15838.1
  • GRAVY: -0.342361

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED  :
    • Similar to cell surface protein Map-w
  • PFAM:
    Ant-toxin_C (CL0386) MAP; MAP domain (PF03642; HMM-score: 121.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 9.68
    • Cellwall Score: 0.17
    • Extracellular Score: 0.16
    • Internal Helix: 1
  • LocateP: N-terminally anchored (with CS)
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: -0.17
    • Signal peptide possibility: 1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: NEVSAAEK
  • SignalP: Signal peptide SP(Sec/SPI) length 30 aa
    • SP(Sec/SPI): 0.973909
    • TAT(Tat/SPI): 0.003194
    • LIPO(Sec/SPII): 0.020514
    • Cleavage Site: CS pos: 30-31. VSA-AE. Pr: 0.7117
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MKLKSFITVTLALGMIATTGATVAGNEVSAAEKDKLPATQKAKEMQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKSAVYTITWKDGSKKEVDLKKDSYTANLFDSNSIKQIDINVKTK

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

[1]

  1. ↑ Daphne A C Stapels, Kasra X Ramyar, Markus Bischoff, Maren von Köckritz-Blickwede, Fin J Milder, Maartje Ruyken, Janina Eisenbeis, William J McWhorter, Mathias Herrmann, Kok P M van Kessel, Brian V Geisbrecht, Suzan H M Rooijakkers
    Staphylococcus aureus secretes a unique class of neutrophil serine protease inhibitors.
    Proc Natl Acad Sci U S A: 2014, 111(36);13187-92
    [PubMed:25161283] [WorldCat.org] [DOI] (I p)    Nitin Mishra, Timothy J Herdendorf, Om Prakash, Brian V Geisbrecht
    Simultaneous inhibition of two neutrophil serine proteases by the S. aureus innate immune evasion protein EapH2.
    J Biol Chem: 2023, 299(7);104878
    [PubMed:37269950] [WorldCat.org] [DOI] (I p)
Retrieved from "http://aureowiki.med.uni-greifswald.de/index.php?title=SAUSA300_0883&oldid=104111"