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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS01525 [old locus tag: SAUSA300_0285 ]
- pan locus tag?: SAUPAN001186000
- symbol: SAUSA300_RS01525
- pan gene symbol?: esxB
- synonym:
- product: virulence factor EsxB
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS01525 [old locus tag: SAUSA300_0285 ]
- symbol: SAUSA300_RS01525
- product: virulence factor EsxB
- replicon: chromosome
- strand: +
- coordinates: 340845..341159
- length: 315
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (340845..341159) NCBI
- BioCyc: SAUSA300_RS01525 BioCyc
- MicrobesOnline: see SAUSA300_0285
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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301ATGGGTGGATATAAAGGTATTAAAGCAGATGGTGGCAAGGTTGATCAAGCGAAACAATTA
GCGGCAAAAACAGCTAAAGATATTGAAGCATGTCAAAAGCAAACGCAACAGCTCGCTGAG
TATATCGAAGGTAGTGATTGGGAAGGACAGTTCGCCAATAAGGTGAAAGATGTGTTACTC
ATTATGGCAAAGTTTCAAGAAGAATTAGTACAACCGATGGCTGACCATCAAAAAGCAATT
GATAACTTAAGTCAAAATCTAGCGAAATACGATACATTATCAATTAAGCAAGGGCTTGAT
AGGGTGAACCCATGA60
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315
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS01525 [old locus tag: SAUSA300_0285 ]
- symbol: SAUSA300_RS01525
- description: virulence factor EsxB
- length: 104
- theoretical pI: 5.87793
- theoretical MW: 11510
- GRAVY: -0.625
⊟Function[edit | edit source]
- ⊞TIGRFAM: WXG100 family type VII secretion target (TIGR03930; HMM-score: 20.8)and 1 more
- TheSEED: see SAUSA300_0285
- ⊞PFAM: EsxAB (CL0352) WXG100; Proteins of 100 residues with WXG (PF06013; HMM-score: 47.8)and 7 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: 446431813 NCBI
- RefSeq: WP_000509668 NCBI
- UniProt: see SAUSA300_0285
⊟Protein sequence[edit | edit source]
- MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLLIMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available