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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS03720 [old locus tag: SAUSA300_0693 ]
- pan locus tag?: SAUPAN002594000
- symbol: SAUSA300_RS03720
- pan gene symbol?: saeP
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS03720 [old locus tag: SAUSA300_0693 ]
- symbol: SAUSA300_RS03720
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 768717..769157
- length: 441
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (768717..769157) NCBI
- BioCyc: SAUSA300_RS03720 BioCyc
- MicrobesOnline: see SAUSA300_0693
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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421ATGAATACAAAATATTTTTTAGCAGCTGGTGCTGTTATCACAACATTAGCTTTAGGTGCT
TGTGGTAATTCTAATTCACAAGATCAAGGTAACAAAACTGAACAAAAAACAAAGTCAGAA
GATAGCAATGTTAAAACTGATAAAACAAAACACCTAACAGGTACATTCAGTTCTAAAAAC
GGTGAAACTGTTGAAGGTAAAGCTGAGATTAAAAATGGTAAATTAATGCTTACTAACTAC
AAATCATCAAAAGGTCCAGATTTATACGTCTACCTAACAAAAAATGGCGACATTAAAAAC
GGTAAAGAAATCGCAATGGTTGACTACGATAAAGAAAAACAAACATTTGATCTTAAAAAT
GTAGATTTAAGCAAATATGATGAAGTAACAATCTATTGTAAAAAAGCTCACGTCATCTTC
GGCGGCGCTAAATTAAAATAA60
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441
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS03720 [old locus tag: SAUSA300_0693 ]
- symbol: SAUSA300_RS03720
- description: hypothetical protein
- length: 146
- theoretical pI: 9.62012
- theoretical MW: 16045.1
- GRAVY: -0.739041
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_0693
- PFAM: no clan defined DM13; Electron transfer DM13 (PF10517; HMM-score: 41.9)and 3 moreDUF1797; Protein of unknown function (DUF1797) (PF08796; HMM-score: 16)YcgL; YcgL domain (PF05166; HMM-score: 12.6)CfAFP; Choristoneura fumiferana antifreeze protein (CfAFP) (PF05264; HMM-score: 12.2)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 3.33
- Cellwall Score: 3.33
- Extracellular Score: 3.33
- Internal Helix: 1
- LocateP:
- SignalP: Signal peptide LIPO(Sec/SPII) length 20 aa
- SP(Sec/SPI): 0.00076
- TAT(Tat/SPI): 0.00011
- LIPO(Sec/SPII): 0.998886
- Cleavage Site: CS pos: 20-21. LGA-CG. Pr: 0.9994
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 447016297 NCBI
- RefSeq: WP_001093553 NCBI
- UniProt: see SAUSA300_0693
⊟Protein sequence[edit | edit source]
- MNTKYFLAAGAVITTLALGACGNSNSQDQGNKTEQKTKSEDSNVKTDKTKHLTGTFSSKNGETVEGKAEIKNGKLMLTNYKSSKGPDLYVYLTKNGDIKNGKEIAMVDYDKEKQTFDLKNVDLSKYDEVTIYCKKAHVIFGGAKLK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: SaeR see SAUSA300_0693
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.