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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS05790 [old locus tag: SAUSA300_1067 ]
- pan locus tag?: SAUPAN003440000
- symbol: SAUSA300_RS05790
- pan gene symbol?: psmβ1
- synonym:
- product: hemolytic protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS05790 [old locus tag: SAUSA300_1067 ]
- symbol: SAUSA300_RS05790
- product: hemolytic protein
- replicon: chromosome
- strand: +
- coordinates: 1168398..1168532
- length: 135
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (1168398..1168532) NCBI
- BioCyc:
- MicrobesOnline:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121ATGGAAGGTTTATTTAACGCAATTAAAGATACCGTAACTGCAGCAATTAATAATGATGGC
GCAAAATTAGGCACAAGCATTGTGAGCATCGTTGAAAATGGCGTAGGTTTATTAGGTAAA
TTATTCGGATTCTAA60
120
135
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS05790 [old locus tag: SAUSA300_1067 ]
- symbol: SAUSA300_RS05790
- description: hemolytic protein
- length: 44
- theoretical pI: 4.54462
- theoretical MW: 4496.17
- GRAVY: 0.570455
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM: no clan defined Staph_haemo; Staphylococcus haemolytic protein (PF05480; HMM-score: 83.4)
⊟Structure, modifications & interactions[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.150184
- TAT(Tat/SPI): 0.002632
- LIPO(Sec/SPII): 0.009262
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MEGLFNAIKDTVTAAINNDGAKLGTSIVSIVENGVGLLGKLFGF
⊟Experimental data[edit | edit source]
- experimentally validated: no data available
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]