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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS07665 [old locus tag: SAUSA300_1405 ]
- pan locus tag?: SAUPAN001835000
- symbol: SAUSA300_RS07665
- pan gene symbol?: —
- synonym:
- product: terminase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS07665 [old locus tag: SAUSA300_1405 ]
- symbol: SAUSA300_RS07665
- product: terminase
- replicon: chromosome
- strand: -
- coordinates: 1571755..1572060
- length: 306
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (1571755..1572060) NCBI
- BioCyc: SAUSA300_RS07665 BioCyc
- MicrobesOnline: see SAUSA300_1405
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
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241
301ATGAAATTAACAAAAAAACAGCTGAAAGAATATATAGAGGATTATAAAAAATCTGATGAC
ATATTAATTAATTTGTATATAGAAACGTATGAATTTTATTGTCGGTTAAGAGATGAACTT
AAAAATAGTGATTTGATGATAGAGCATACAAACAAGGCTGGTGCGAGCAATATTGTTAAG
AATCCATTAAGCATAGAACTGACAAAAACAGTTCAAACACTAAATAACTTACTCAAGTCT
ATGGGTTTAACTGCAGCACAAAGAAAAAAGATAGTTCAAGAAGAAGGTGGATTCGGTGAC
TATTAA60
120
180
240
300
306
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS07665 [old locus tag: SAUSA300_1405 ]
- symbol: SAUSA300_RS07665
- description: terminase
- length: 101
- theoretical pI: 8.40935
- theoretical MW: 11707.4
- GRAVY: -0.591089
⊟Function[edit | edit source]
- TIGRFAM: Mobile and extrachromosomal element functions Prophage functions putative phage terminase, small subunit, P27 family (TIGR01558; HMM-score: 33.2)and 1 moreCentral intermediary metabolism Phosphorus compounds polyphosphate:AMP phosphotransferase (TIGR03708; EC 2.7.4.-; HMM-score: 11)
- TheSEED: see SAUSA300_1405
- PFAM: no clan defined Terminase_4; Phage terminase, small subunit (PF05119; HMM-score: 39.4)and 1 moreALIX_LYPXL_bnd; ALIX V-shaped domain binding to HIV (PF13949; HMM-score: 13)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.004573
- TAT(Tat/SPI): 0.0003
- LIPO(Sec/SPII): 0.000358
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 446701587 NCBI
- RefSeq: WP_000778933 NCBI
- UniProt: see SAUSA300_1405
⊟Protein sequence[edit | edit source]
- MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVKNPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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