Jump to navigation
Jump to search
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS15380 [old locus tag: SAUSA300_1643 ]
- pan locus tag?: SAUPAN004323000
- symbol: SAUSA300_RS15380
- pan gene symbol?: —
- synonym:
- product: IS5/IS1182 family transposase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS, pseudogene
- locus tag: SAUSA300_RS15380 [old locus tag: SAUSA300_1643 ]
- symbol: SAUSA300_RS15380
- product: IS5/IS1182 family transposase
- replicon: chromosome
- strand: -
- coordinates: 1802471..1804122
- length: 1652
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (1802471..1804122) NCBI
- BioCyc: SAUSA300_RS15380 BioCyc
- MicrobesOnline: see SAUSA300_1643
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621ATGTATAAAATTTATAACATGACCCAACTTACACTACCAATAGAAACCTCTGTTAGAATT
CCTCAAAATGATATTTCGCGATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAA
TTCGATGAATTCAGACATCATCGTGGCGCAACATCCTATCATCCAAAAATGATGTTAAAA
ATCATCTTATATGCATATACTCAATCTGTATTTTCTGGTCGTAGAATAGAAAAATTACTT
CATGACAGTATTCGAATGATGTGGTTAGCTCAAGATCAAACACCTTCTTATAAAACTATT
AATCGTTTTAGAGTGAATCCTAATACTGATGCGTTAATTGAATCTTTATTTATTCAGTTC
CATAGTCAATGTTTAAAGCAAAATCTTATTGATAATAATTCAATTTTTATTGATGGTACA
AAAGTAGAAGCTAATGCCAATAGATATACATTTGTGTGGAAGAAAAGTATTCAAAATCAC
GAATCGAAATTGAACGAAAATTCAAAAACATTATATCGTGACTTAGTTGAAGAAAAAATA
ATACCAGAGATAAAAGAAGATGGAGATAGCGATTTAACAATAGAAGAAATAGATTTAATT
GGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATTCTATTGAGAACGAAGATTGT
GCTCAAATTAGAAAACAGACCCGTAAAAAAATAACTGAGATTAAGAAGTTCAAAAAGAAA
TTTGATGATTATTCCGAAAGAAAAAATAAATATGAAGAACAAAAATCGATTCTTAAAGAT
AGAAATAGTTTTTCTAAAACTGATCTGATCATGATGCAACTTTTATGAGAATGAAGGAAG
ACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAATAGCGACAAATTCTC
AATTTGTTTTATCCTATGACCTATTTCAAAACCCAACAGATACTAGAACATTAATCCCAT
TTTTAACAATGATTCAAAATACCTTCGGTTATTTACCAGAGTATATTGTAGCTGATGCAG
GTTATGGTAGTGAGCAAAACTATATGGCTATTATAGATGATTTTAATAAAACGCCACTTA
TTACGTATGGCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAAGTGGCATTTTCAACA
CTCAAAATTGGAAATATGACGAACTTAATAATGAATTTATATGTCCTAATAACAAAAGAA
TAGGTTTTAAAAGATATGCATACCGTAATGATAGATATGGTTTTAAACGAGACTTCAAAC
TATATGAATGTGATGACTGTTCATCATGTTCTTTGAGACATCAATGCATGAAACCAAATT
CGAAATCCAATAAGAAAATCATGAAGAATTATAATTGGGAATACTTTAAAGTCCAAATTA
ATCAAAAGCTTTCTGAACCAGAAACGAAAAACATCTATAGTCAAAGAAAAATTGATGTAG
AGCCTGCTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAA
TAAATAAAGTTAAACGAGAGCTAGGTTTTGTATTGATGGCACTTAATATAAGGAAAATAG
CAGCTCAACGAGCTGTACATTATAAAATACATATCAAAAAAGCTGATTTCTATCAAATAA
TTAATAGAAATCAGCTTTTTTACATTGCCTAA60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1080
1140
1200
1260
1320
1380
1440
1500
1560
1620
1652
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS15380 [old locus tag: SAUSA300_1643 ]
- symbol: SAUSA300_RS15380
- description: IS5/IS1182 family transposase
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for NCTC8325
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- LocateP:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.