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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS03280 [old locus tag: SA0567 ]
- pan locus tag?: SAUPAN002477000
- symbol: SA_RS03280
- pan gene symbol?: —
- synonym:
- product: iron ABC transporter permease
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901ATGACATTTAATAAAGTATTATTGAGCTGGATAGTCATATTGATTATAACAACTAGCATA
TATCTATTTTGGCAGTTGGGGGATATCAATGATGTATTTAACCAGTCTATTTTAATCAAT
GTTAGATTACCGAGATTATTAGAAGCATTGTTGACAGGTATGATATTAACAGTTGCAGGT
CTTATATTTCAAACAGTTTTAAATAATGCATTGGCAGATAGCTTTACATTAGGATTGGCA
AGCGGTGCTACATTTGGTTCAGGATTAGCATTATTTTTAGGTTTAACAACGTTATGGATT
CCTGTATTTTCAATAACATTTAGTTTGATAACATTAATAACTGTATTAGTCATTACGTCG
GTATTGAGCCAAGGCTATCCAGTTAGAATCTTAATATTAAGTGGTTTAATGATTGGTGCA
TTATTCAATTCACTTCTATATTTTTTGATTTTATTAAAACCTCGCAAATTAAATACAATT
GCCAATTATTTGTTTGGTGGCTTTGGTGATGCAGAATACTCAAATGTATCCATAATAGCA
ATCACATTTATCATTGCACTGTTTGGTATATTTATCATTCTTAATCAACTAAAGTTATTG
CAATTAGGAGAACTAAAAAGTCAGTCACTAGGCTTAAATGTTCAATTGATTACATATATC
GCGTTATGTATAGCTTCTATGATAACGGCGATAAATGTCGCATATGTTGGCATCATTGGA
TTCATTGGTATGGTGATACCACAACTCATTAGAAAATGGCAGTGGAAACAATCATTAGGA
AGACAATTGGCTTTGAATATTGTAATTGGAGGACAAATAATGGTTATGGCAGATTTTATT
GGTAGCCATATACTGTCACCAGTACAAATACCGGCAAGCATTATTATTGCATTAATTGGT
ATACCAGTGTTATTTTACATGCTAATATCTCAGTCGAAACGGTTACACTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS03280 [old locus tag: SA0567 ]
- symbol: SA_RS03280
- description: iron ABC transporter permease
- length: 316
- theoretical pI: 10.0583
- theoretical MW: 34616.7
- GRAVY: 1.1557
⊟Function[edit | edit source]
- TIGRFAM: proposed F420-0 ABC transporter, permease protein (TIGR03869; HMM-score: 120.9)and 1 moreProtein fate Protein and peptide secretion and trafficking protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic (TIGR00327; HMM-score: 8.1)
- TheSEED: see SA0567
- PFAM: Membrane_trans (CL0142) FecCD; FecCD transport family (PF01032; HMM-score: 214.7)and 1 moreABC-3; ABC 3 transport family (PF00950; HMM-score: 24)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 9
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.005658
- TAT(Tat/SPI): 0.000105
- LIPO(Sec/SPII): 0.007409
- predicted transmembrane helices (TMHMM): 10
⊟Protein sequence[edit | edit source]
- MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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