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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS10155 [old locus tag: SA1766 ]
  • pan locus tag?: SAUPAN005048000
  • symbol: SA_RS10155
  • pan gene symbol?: —
  • synonym:
  • product: phage tail tape measure protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS10155 [old locus tag: SA1766 ]
  • symbol: SA_RS10155
  • product: phage tail tape measure protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2018761..2023290
  • length: 4530
  • essential: no DEG

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (2018761..2023290) NCBI
  • BioCyc: SA_RS10155 BioCyc
  • MicrobesOnline: see SA1766

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
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    481
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    1021
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    4201
    4261
    4321
    4381
    4441
    4501
    ATGGGAGAAAGAATAAAAGGTTTATCTATAGGTTTGGATTTAGATGCAGCAAATTTAAAT
    AGATCATTTGCAGAAATCAAACGAAACTTTAAAACTTTAAATTCTGACTTAAAGTTAACC
    GGTAACAACTTCAAATATACCGAAAAATCAACTCATAGTTACAAACAAAGGATTAAAGAA
    CTTGATGGAACTATCACAGGTTATAAGAAAAACGTTGATGATTTAGCCAAGCAATATGGC
    AAGGTATCTCAAGAACAGGGCGAAAACAGCGCGGAAGCTCAAAAATTACGACAAGAATAT
    AACAAACAAGCAAATGAGCTGAATTTTTTAGAAAAAGAACTAGAAAAAACAACAACTGAG
    TTTGAAGAGTTCAAAAAAGCTCAAGTTGAAGCTCAAAGAATGGCAGAAAGTGGCTGGGGA
    AAAACCAGTAAAGTTTTTGAAAGTATGGGACCTAAATTAACAAAAATGGGTGATGGTTTA
    AAATCCATTGGTAAAGGTTTGATGATTGGTGTAACTGCACCTGTTTTAGGTATTGCAGCA
    GCATCAGGAAAAGCTTTTGCAGAAGTTGATAAAGGTTTAGATACAGTTACCCAAGCAACA
    GGAGCAACCGGCGGAGAGCTTAAGAAGTTGCAGAATTCATTTAAAGATGTTTATGGCAAC
    TTTCCAGAAGACGCTGAGACTGTAGGCGGTGTTTTAGGGGAAGTTAACACAAGGTTAGGT
    TTCACTGGCAAAGAACTTGAGAGTGCCACAGAGTCATTCTTGAAATTTAGTCACATAACA
    GGTTCTGACGGCGTACAAGCCGTTCAATTAATTACGCGTGCAATGGGTGATGCAGGTATT
    GAAGCTGATGAGTATCAAAGTGTACTTGATATGGTAGCGAAAGCAGCACAGGCTAGCGGT
    ATAAGTGTTGATACATTAGCTGATAGCATTACTAAATACGGTGCTCCAATGAGGGCTATG
    GGCTTTGAGATGAAAGAATCAATCGCTTTATTCTCTCAATGGGAGAAATCAGGTGTTAAT
    ACTGAAATAGCCTTCAGTGGTTTGAAAAAAGCTATATCCAATTGGGGTAAAGCGGGTAAA
    GACCCAAGAGAAGAATTTAAGAAGACATTAGCAGAAATTGAAAGGACACCGGATATAGCT
    AGCGCAACAAGTTTAGCGATTGAAGCATTTGGTGCAAAAGCAGGTCCTGATTTAGCAGAT
    GCTATTAAAGGCGGTCGCTTTAGTTACCAAGAGTTCTTAAAAACTATCGAAGATTCGCAA
    GGAACGGTCAATCAGACATTTAAAGATTCTGAAAGTGGCTCCGAAAGATTTAAAGTAGCA
    ATGAATAAACTTAAATTAGTAGGTGCTGATGTATGGGCTTCTATTGAAAGTGCGTTTGCT
    CCAGTCATGGAAGAATTAATCAAAAAGCTATCTGTAGCAGTTGATTGGTTTTCAAGTTTA
    AGTGATGGATCTAAAAGGTCGATTGTTATATTCGGTGGTATTGCTGCTGCAATTGGTCCT
    GTAGTTTTTGGATTAGGTGCATTCATAAGCACAGTTGGCAACGCAGTAACTGTATTAGCT
    CCATTATTAGCTAGTATTGCAAAGGCTGGTGGATTGATTAGTTTTTTATCGACTAAAGTA
    CCTATATTAGGAACTGTCTTCACAGCTTTAACTGGTCCAATTGGCATTGTATTAGGTGTA
    TTGGCTGGTTTAGCAGTCGCATTTACAATTGCTTATAAGAAATCTGAAACATTTAGAAAT
    TTTGTTAATGGTGCAATTGAAAGTGTTAAACAAACATTTAGTAATTTTATTCAATTTATT
    CAACCTTTCATTGATTCTGTTAAAAACATCTTTAAACAAGCGATATCAGCAATAGTTGAT
    TTTGCTAAAGATATTTGGAGTCAAATCAATGGATTCTTTAATGAAAATGGAATTTCCATT
    GTTCAAGCACTTCAAAATATATGCAACTTTATTAAAGCGATATTTGAATTTATTTTAAAT
    TTTGTAATTAAACCAATTATGTTCGCAATCTGGCAAGTGATGCAATTTATTTGGCCGGCG
    GTTAAAGCCTTGATTGTCAGCACTTGGGAAAATATCAAAGGTGTAATACAAGGGGCTATT
    AATATTATTTTGGGTATTATCAAAGTGTTCTCTAGTCTTTTCACAGGAAACTGGCGAGGC
    GTTTGGGACGGCATTGTAATGATACTGAAAGGTACTGTGCAGTTAATTTGGAATTTAATT
    CAATTATGGTTTGTAGGCAAAATACTTGGCGTTGTTAGGTACTTTGGCGGATTGCTAAAA
    GGTTTAATAACTATTATATGGGTTGCTATAATAGGCGTTTTCAAGAAATCATTATCGGCA
    ATTTGGAATGCAACAAAAAGTATTTTTGGTTTCTTATTCAATAGTGTTAAATCTATTTTC
    ACTAATATGAAAAACTGGTTATCTAGTACGTGGAATAATATCAAAAGCAATACCGTCGGC
    AAGGCTCATTCGTTATTTACGGGTGTAAGGTCTAAATTCACAAGTTTATGGAATGCGACG
    AAAGATATATTTATTAAATTAAGAAATTGGATGTCAAACATCTGGAACTCTATTAAAGAT
    AACACTGTAGGTATAGCTGGTCGCTTATGGGATAGAGTGCGTAACATCTTTGGAAGCATG
    CGTGACGGTTTAAAATCTATCATTGGTAAAATTAAAGATCATATCGGTGGTATGGTAGAC
    GCTGTTAAAAGAGGTCTTAATAAATTAATTGAAGGTTTAAACTGGGTCGGTGGTAAGTTG
    GGTATGGACAAAATACCGAAGTTACACACTGGTACTGAACATACGCATACTACTACAAGA
    TTAGTTAAGAACGGTAAGATTGCGCGGGATACGTTCGCTACGGTTGGGGATAAAGGACGT
    GGAAATGGTCCGAATGGTTTCAGAAATGAAATGATTGAATTCCCTAATGGCAAACGGGTA
    CTTACGCCTAATACAGATACGACAGCGTACTTACCTAAAGGTTCAAAAGTATATAACGGC
    GCACAAACTTATTCAATGTTAAATGGAACGCTTCCAAGATTTAGCATAGGTACTATGTGG
    AAAGATATTAAATCCGGTGCATCATCGGCATTTAACTGGACAAAAGATCAAATAGGTAAA
    GGTACCAAATGGCTTGGCGATAAAGTTGGCGATGTTTTAGATTTTATTGAAAATCCAGGC
    AAACTTTTAAATTATATACTTGAAGCTTTTGGAATTGATTTCAATTCTTTAACTAAAGGT
    ATGGGAATTGCAGGCGACATAACAAAAGCTGCATGGTCTAAGATTAAGAAAAGTGCTACT
    GATTGGATAAAAGAAAATTTAGAAGCTATGGGCGGTGGCGATTTAGTCGGCGGAATATTA
    GACCCTGACAAAATTAATTATCATTATGGACGTACCGCAGCTTATACCGCTGCAACTGGA
    AGACCATTTCATGAAGGTGTCGATTTTCCATTTGTATATCAAGAAGTTAGAACGCCGATG
    GGTGGCAGACTTACAAGAATGCCATTTATGTCTGGTGGTTATGGTAATTATGTAAAAATT
    ACTAGTGGCGTTATCGATATGCTATTTGCGCATTTGAAAAACTTTAGCAAATCACCACCT
    AGTGGCACGATGGTAAAGCCCGGTGATGTTGTTGGTTTAACTGGTAATACCGGATTTAGT
    ACAGGACCACATTTACATTTTGAAATGAGGAGAAATGGACGACATTTTGACCCTGAACCA
    TATTTAAGGAATGCTAAGAAAAAAGGAAGATTATCAATAGGTGGTGGCGGTGCTACTTCT
    GGAAGTGGCGCAACTTATGCCAGTCGAGTAATCCGACAAGCGCAAAGTATTTTAGGTGGT
    CGTTATAAAGGTAAGTGGATTCATGACCAAATGATGCGCGTTGCAAAACGTGAAAGTAAC
    TACCAGTCAAATGCAGTGAATAACTGGGATATAAATGCTCAAAGAGGAGACCCATCAAGA
    GGATTATTCCAAATCATCGGCTCAACTTTTAGAGCAAACGCTAAACGTGGATATACTAAC
    TTTAATAATCCGGTTCATCAAGGTATTTCAGCAATGCAGTACATTGTTAGACGCTACGGT
    TGGGATGGATTTAAGCGTGCGGGTGATTACGCATATGCTACAGGCGGAAAAGTTTTTGAT
    GGTTGGTATAACTTAGGTGAAGACGGTCATCCAGAATGGGTTATTCCAACAGATCCAGCT
    CGTAGAAATGATGCAATGAAGATGTTACATTATGCAGCTGCGGAAGTTAGAGGGAAAAAC
    GCAAGTAAGAATAAACGACCTAGTCAATTATCTAGTGTAAATGGGTTTGATGACCCAAGC
    TTATTATTGAAAATGATTGAACAACAGCAACAACAAATAGCTTTATTACTGAAGATAGCG
    CAATCTAACGATGTGATTGCAGATAAAGATTATCAGCCGATTATTGACGAATACGCTTTT
    GATAAAAAGGTGAACGCGTCTATAGAAAAGCGAGAAAGGCAAGAATCAACAAAAGTAAAG
    TTTAGAAAAGGAGGAATTGCTATTCAATGA
    60
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    4530

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS10155 [old locus tag: SA1766 ]
  • symbol: SA_RS10155
  • description: phage tail tape measure protein
  • length: 1509
  • theoretical pI: 10.233
  • theoretical MW: 165436
  • GRAVY: -0.187939

⊟Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Mobile and extrachromosomal element functions Prophage functions phage tail tape measure protein, TP901 family, core region (TIGR01760; HMM-score: 61.8)
    and 11 more
    Cellular processes Cellular processes Cell division chromosome segregation protein SMC (TIGR02168; HMM-score: 23.8)
    Genetic information processing DNA metabolism Chromosome-associated proteins chromosome segregation protein SMC (TIGR02168; HMM-score: 23.8)
    Cellular processes Cellular processes Cell division chromosome segregation protein SMC (TIGR02169; HMM-score: 23.8)
    Genetic information processing DNA metabolism Chromosome-associated proteins chromosome segregation protein SMC (TIGR02169; HMM-score: 23.8)
    two transmembrane protein (TIGR04527; HMM-score: 22.9)
    Unknown function Enzymes of unknown specificity quinoprotein relay system zinc metallohydrolase 2 (TIGR04559; EC 3.-.-.-; HMM-score: 13.6)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair DnaD domain protein (TIGR01446; HMM-score: 12.6)
    Genetic information processing Mobile and extrachromosomal element functions Prophage functions DnaD domain protein (TIGR01446; HMM-score: 12.6)
    Genetic information processing Protein synthesis tRNA aminoacylation serine--tRNA ligase (TIGR00414; EC 6.1.1.11; HMM-score: 11.7)
    SH3 domain protein (TIGR04211; HMM-score: 8.1)
    helix-rich protein (TIGR04523; HMM-score: 1.9)
  • TheSEED: see SA1766
  • PFAM:
    no clan defined PhageMin_Tail; Phage-related minor tail protein (PF10145; HMM-score: 67.4)
    Hybrid (CL0105) Peptidase_M23; Peptidase family M23 (PF01551; HMM-score: 61.9)
    and 28 more
    Lysozyme (CL0037) SLT; Transglycosylase SLT domain (PF01464; HMM-score: 23.9)
    no clan defined DUF948; Bacterial protein of unknown function (DUF948) (PF06103; HMM-score: 18.5)
    TPR_MLP1_2; TPR/MLP1/MLP2-like protein (PF07926; HMM-score: 16.7)
    Goodbye; fungal STAND N-terminal Goodbye domain (PF17109; HMM-score: 15.3)
    EsxAB (CL0352) WXG100; Proteins of 100 residues with WXG (PF06013; HMM-score: 14.1)
    no clan defined TMP_2; Prophage tail length tape measure protein (PF06791; HMM-score: 13.5)
    EzrA; Septation ring formation regulator, EzrA (PF06160; HMM-score: 13.2)
    YtxH; YtxH-like protein (PF12732; HMM-score: 13.2)
    FapA; Flagellar Assembly Protein A (PF03961; HMM-score: 13.1)
    BCLiA (CL0551) APG6; Autophagy protein Apg6 (PF04111; HMM-score: 12.9)
    no clan defined DUF745; Protein of unknown function (DUF745) (PF05335; HMM-score: 12.4)
    YebO; YebO-like protein (PF13974; HMM-score: 12.3)
    TACC; Transforming acidic coiled-coil-containing protein (TACC) (PF05010; HMM-score: 12.1)
    TMPIT; TMPIT-like protein (PF07851; HMM-score: 11.5)
    Laminin_I; Laminin Domain I (PF06008; HMM-score: 11.4)
    GAS; Growth-arrest specific micro-tubule binding (PF13851; HMM-score: 11.3)
    HTH (CL0123) Mnd1; Mnd1 family (PF03962; HMM-score: 11.1)
    no clan defined Baculo_PEP_C; Baculovirus polyhedron envelope protein, PEP, C terminus (PF04513; HMM-score: 10.7)
    Spc24; Spc24 subunit of Ndc80 (PF08286; HMM-score: 10.1)
    BLOC1_2; Biogenesis of lysosome-related organelles complex-1 subunit 2 (PF10046; HMM-score: 9.9)
    DUF16; Protein of unknown function DUF16 (PF01519; HMM-score: 9.8)
    tRNA_bind_arm (CL0298) Seryl_tRNA_N; Seryl-tRNA synthetase N-terminal domain (PF02403; HMM-score: 9.7)
    no clan defined OmpH; Outer membrane protein (OmpH-like) (PF03938; HMM-score: 8.8)
    Phage_GPO; Phage capsid scaffolding protein (GPO) serine peptidase (PF05929; HMM-score: 8.8)
    HeLo; Prion-inhibition and propagation (PF14479; HMM-score: 8)
    Carbpep_Y_N; Carboxypeptidase Y pro-peptide (PF05388; HMM-score: 7.5)
    Tho2; Transcription factor/nuclear export subunit protein 2 (PF11262; HMM-score: 6.5)
    DUF4407; Domain of unknown function (DUF4407) (PF14362; HMM-score: 6.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.01
    • Cytoplasmic Membrane Score: 9.35
    • Cellwall Score: 0.32
    • Extracellular Score: 0.32
    • Internal Helices: 6
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.020835
    • TAT(Tat/SPI): 0.002675
    • LIPO(Sec/SPII): 0.001517
  • predicted transmembrane helices (TMHMM): 6

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MGERIKGLSIGLDLDAANLNRSFAEIKRNFKTLNSDLKLTGNNFKYTEKSTHSYKQRIKELDGTITGYKKNVDDLAKQYGKVSQEQGENSAEAQKLRQEYNKQANELNFLEKELEKTTTEFEEFKKAQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGLKSIGKGLMIGVTAPVLGIAAASGKAFAEVDKGLDTVTQATGATGGELKKLQNSFKDVYGNFPEDAETVGGVLGEVNTRLGFTGKELESATESFLKFSHITGSDGVQAVQLITRAMGDAGIEADEYQSVLDMVAKAAQASGISVDTLADSITKYGAPMRAMGFEMKESIALFSQWEKSGVNTEIAFSGLKKAISNWGKAGKDPREEFKKTLAEIERTPDIASATSLAIEAFGAKAGPDLADAIKGGRFSYQEFLKTIEDSQGTVNQTFKDSESGSERFKVAMNKLKLVGADVWASIESAFAPVMEELIKKLSVAVDWFSSLSDGSKRSIVIFGGIAAAIGPVVFGLGAFISTVGNAVTVLAPLLASIAKAGGLISFLSTKVPILGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSETFRNFVNGAIESVKQTFSNFIQFIQPFIDSVKNIFKQAISAIVDFAKDIWSQINGFFNENGISIVQALQNICNFIKAIFEFILNFVIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGVIQGAINIILGIIKVFSSLFTGNWRGVWDGIVMILKGTVQLIWNLIQLWFVGKILGVVRYFGGLLKGLITIIWVAIIGVFKKSLSAIWNATKSIFGFLFNSVKSIFTNMKNWLSSTWNNIKSNTVGKAHSLFTGVRSKFTSLWNATKDIFIKLRNWMSNIWNSIKDNTVGIAGRLWDRVRNIFGSMRDGLKSIIGKIKDHIGGMVDAVKRGLNKLIEGLNWVGGKLGMDKIPKLHTGTEHTHTTTRLVKNGKIARDTFATVGDKGRGNGPNGFRNEMIEFPNGKRVLTPNTDTTAYLPKGSKVYNGAQTYSMLNGTLPRFSIGTMWKDIKSGASSAFNWTKDQIGKGTKWLGDKVGDVLDFIENPGKLLNYILEAFGIDFNSLTKGMGIAGDITKAAWSKIKKSATDWIKENLEAMGGGDLVGGILDPDKINYHYGRTAAYTAATGRPFHEGVDFPFVYQEVRTPMGGRLTRMPFMSGGYGNYVKITSGVIDMLFAHLKNFSKSPPSGTMVKPGDVVGLTGNTGFSTGPHLHFEMRRNGRHFDPEPYLRNAKKKGRLSIGGGGATSGSGATYASRVIRQAQSILGGRYKGKWIHDQMMRVAKRESNYQSNAVNNWDINAQRGDPSRGLFQIIGSTFRANAKRGYTNFNNPVHQGISAMQYIVRRYGWDGFKRAGDYAYATGGKVFDGWYNLGEDGHPEWVIPTDPARRNDAMKMLHYAAAEVRGKNASKNKRPSQLSSVNGFDDPSLLLKMIEQQQQQIALLLKIAQSNDVIADKDYQPIIDEYAFDKKVNASIEKRERQESTKVKFRKGGIAIQ

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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