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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS11270 [old locus tag: SA1964 ]
- pan locus tag?: SAUPAN005501000
- symbol: SA_RS11270
- pan gene symbol?: fmtB
- synonym:
- product: FmtB protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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7441ATGAATTTATTCAGACAACAAAAATTTAGTATCAGAAAATTTAATGTCGGTATTTTTTCA
GCTTTAATTGCCACTGTTACTTTTATATCTACTAACCCGACAACAGCGTCTGCAGCAGAG
CAAAATCAGCCTGCACAAAATCAACCAGCACAACCAGCTGATGCCAATACACAGCCTAAC
GCAAATGCTGGTGCTCAAGCTAATCCTGCAGCACAGCCAGCAAACCAAGGTGGACAGGCT
AATCCAGCAGGAGGAGCAGCACAACCAGCTGGACAAGGTAATCAAGCTGATCCGAATAAC
GCTGCACAAGCACAACCTGGAAATCAAGCAGCACCGGCAAACCAAGCAGGTCAAGGAAAT
AACCAAGCAACACCTAATAATAATGCAACACCGGCAAATCAAACACAGCCAGCGAATGCT
CCAGCAGCAGCGCAACCAGCAGCACCTGTAGCAGCAAACGCACAAACTCAAGATCCAAAT
GCTAGCAATACTGGTGAAGGCAGTATTAATACGACATTAACATTTGATGATCCTGCCATA
TCAACAGATGAGAATAGACAGGATCCAACTGTAACTGTTACAGATAAAGTAAATGGTTAT
TCATTAATTAACAACGGTAAGATTGGTTTCGTTAACTCAGAATTAAGACGAAGCGATATG
TTTGATAAGAATAACCCTCAAAACTATCAAGCTAAAGGAAACGTGGCTGCATTAGGTCGT
GTGAATGCAAATGATTCTACAGATCATGGTAACTTTAACGGTATTACAAAAACTGTAAAT
GTAAAACCAGATTCAGAATTAATTATTAACTTTACTACTATGCAAACGAATAGTAAGCAA
GGTGCAACAAATTTAGTTATTAAAGATGCTAAGAAAAATACTGAATTAGCAACTGTAAAT
GTTGCTAAGACTGGTACTGCACATTTATTTAAAGTACCAACTGATGCTGATCGTTTAGAT
TTACAATTTATTCCTGACAATACAGCAGTTGCTGATGCTTCAAGAATTACAACAAATAAA
GATGGTTATAAATACTATTCATTCATTGATAATGTAGGTCTATTCTCAGGATCACATTTA
TATGTCAAAAATAGAGATTTAGCACCGAAAGCAACTAACAATAAAGAATATACTATTAAT
ACTGAAATCGGTAACAATGGTAATTTTGGTGCTTCATTAAAAGCAGATCAATTTAAATAT
GAAGTAACATTACCACAAGGTGTAACTTACGTTAATGATTCATTAACTACAACATTCCCT
AATGGTAATGAAGACAGTACAGTATTGAAAAATATGACTGTTAATTATGATCAAACTGCA
AATAAAGTTACATTTACAAGCCAAGGTGTGACAACGGCACGTGGTACACACACTAAAGAA
GTTTTATTCCCAGATAAATCTTTAAAATTATCATATAAAGTTAATGTTGCGAATATCGAT
ACACCTAAAAATATTGATTTTAATGAAAAATTAACATATCGTACTGCTTCAGATGTTGTA
ATTAATAATGCGCAACCAGAAGTTACACTAACTGCAGATCCATTTTCAGTAGCGGTTGAA
ATGAACAAAGATGCGTTGCAACAACAAGTAAACTCACAAGTTGATAATAGTCATTACACA
ACAGCATCAATTGCAGAATACAATAAACTTAAACAACAAGCAGACACTATTTTAAATGAA
GATGCGAATCACGTTGAAACTGCAAATCGTGCATCTCAAGCGGATATTGACGGTTTAGTA
ACTAAATTACAAGCTGCATTAATTGATAATCAAGCAGCAATTGCTGAATTAGATACTAAA
GCTCAAGAAAAGGTTACAGCAGCACAACAAAGTAAAAAAGTTACGCAAGATGAAGTTGCA
GCGCTTGTGACTAAAATTAACAATGATAAAAATAATGCAATCGCAGAAATTAATAAACAA
ACAACATCACAAGGTGTCACAACTGAAAAAGATAATGGTATCGCAGTGTTAGAACAAGAT
GTGATTACACCAACAGTTAAACCTCAAGCGAAACAAGATATTATCCAAGCAGTTACAACT
CGTAAACAACAAATTAAAAAGTCAAATGCATCATTACAAGATGAAAAAGATGTAGCAAAT
GATAAAATTGGTAAAATTGAAACAAAGGCAATTAAAGATATTGATGCAGCAACAACAAAT
GCACAAGTAGAAGCCATTAAAACAAAAGCAATCAATGATATTAATCAAACTACACCTGCT
ACAACAGCTAAAGCAGCAGCTCTTGAAGAATTTGACGAAGTTGTTCAAGCACAAATTGAT
CAAGCACCTTTAAATCCTGATACAACAAATGAAGAAGTAGCGGAAGCTATTGAACGTATT
AATGCAGCTAAAGTTTCTGGTGTTAAAGCAATTGAAGCGACAACGACTGCACAAGATTTA
GAACGCGTTAAAAACGAAGAAATATTCAAAATTGAGAATATTACGGATTCAACTCAAACT
AAAATGGATGCTTATAAAGAAGTTAGACAAGCAGCTACAGCTAGAAAAGCGCAAAATGCT
ACAGTTTCAAATGCAACTGATGAAGAAGTAGCAGAGGCAAATGCAGCAGTAGATGCAGCT
CAAACAGAAGGTTTACATGACATCCAAGTTGTTAAATCACAACAAGAAGTGGCTGATACT
AAAGCAAAAGTATTAGATAAAATCAATGCAATTCAAACACAAGCAAAAGTTAAACCTGCA
GCTGATACAGAAGTAGAAAACGCATATAATACACGTAAACAAGAAATCCAAAATAGCAAT
GCTTCAACTACAGAAGAAAAAGAAGCTGCATATACAGAATTAGATGCTAAAAAGCAAGAA
GCAAGAACAAATCTTGATGCTGCAAATACAAACAGTGATGTAACAACAGCTAAAGACAAT
GGTATTGCTGCAATTAATCAAGTGCAAGCTGCCACAACTAAGAAATCGGATGCTAAAGCG
GAAATCGCTCAAAAAGCAAGTGAACGTAAAACTGCAATTGAAGCAATGAATGATTCGACT
ACTGAAGAACAACAAGCTGCAAAAGATAAAGTTGATCAAGCAGTAGTTACTGCAAACGCT
GATATAGATAATGCTACAGCAAATACAGATGTAGATAATGCAAAAACTACTAATGAAGCT
ACAATAGCTGCAATTACGCCAGATGCAAATGTTAAACCAGCAGCAAAACAAGCAATTGCA
GATAAAGTACAAGCTCAAGAAACAGCAATTGATGCTAATAACGGTTCAACAACAGAAGAA
AAAGAAGCTGCTAAACAACAAGTTCAAACTGAAAAAACGGCTGCTGATGCAGCAATAGAT
GCAGCTCATTCAAATGTGGAAGTTGAAGCGGCTAAAAATGCAGAAATTGCTAAAATTGAA
GCGATTCAGCCAGCAACAACAACTAAAGATAATGCGAAACAAGCAATTGCTACGAAAGCG
AATGAACGTAAAACAGCAATCGCTCAAACGCAAGATATTACTGCTGAAGAAATTGCAGCG
GCTAATGCGGACGTAGATAATGCTGTGACACAAGCAAATAGCAACATTGAAGCTGCTAAT
AGTCAAAATGATGTAGACCAAGCGAAAACGACAGGTGAAACTAGTATTGATCAAGTAACA
CCAACAGTTAATAAAAAAGCAACTGCACGTAATGAAATCACAGCAATTTTAAATAACAAA
TTGCAAGAGATTCAAGCTACACCAGATGCAACAGATGAAGAAAAACAAGCAGCTGATGCA
GAAGCAAATACTGAAAATGGTAAAGCAAATCAAGCCATTTCAGCAGCAACTACTAACGCA
CAAGTTGATGAAGCGAAAGCTAATGCAGAAGCAGCAATTAATGCGGTAACACCAAAAGTT
GTTAAGAAACAAGCGGCTAAAGATGAGATTGATCAATTACAAGCAACGCAAACAAATGTT
ATCAATAATGATCAGAACGCTACAAATGAAGAAAAAGAAGCAGCTATTCAACAATTAGCA
ACAGCAGTTACAGACGCGAAAAATAATATTACAGCTGCAACTGATGATAATGGTGTAGAT
ACAGCGAAAGACGCTGGAAAGAATTCAATTCAAAGCACACAACCAGCAACAGCAGTTAAA
TCGAATGCGAAAAATGAAGTTGATCAAGCTGTGACAACTCAAAATCAAGCAATTGATAAT
ACAACTGGCGCTACAACTGAAGAGAAAAATGCAGCAAAAGATTTAGTTTTAAAAGCTAAA
GAAAAAGCGTATCAAGATATCTTAAATGCACAAACAACTAATGATGTTACGCAAATTAAA
GATCAAGCAGTTGCTGATATTCAAGGTATTACTGCAGATACAACAATTAAAGATGTTGCG
AAAGATGAATTAGCAACAAAAGCAAACGAACAAAAAGCGCTTATTGCACAAACTGCAGAT
GCGACTACTGAAGAAAAAGAACAAGCAAATCAACAAGTAGACGCACAATTAACACAAGGT
AATCAAAATATTGAAAATGCACAGTCAATCGATGATGTAAACACTGCAAAAGATAATGCA
ATTCAAGCAATTGACCCAATTCAAGCATCAACAGATGTTAAAACGAATGCAAGAGCAGAA
TTGCTAACTGAAATGCAAAATAAAATAACTGAAATACTTAATAATAATGAGACTACTAAT
GAAGAAAAAGGTAACGATATTGGACCAGTTAGAGCAGCATATGAAGAAGGTTTAAATAAT
ATTAATGCAGCAACTACTACAGGTGATGTAACTACTGCTAAAGATACAGCAGTACAAAAA
GTTCAACAACTTCATGCAAATCCTGTTAAGAAACCAGCAGGTAAAAAAGAATTAGATCAA
GCTGCAGCTGATAAGAAAACACAAATAGAACAAACACCAAATGCATCACAACAAGAAATT
AATGATGCAAAACAAGAAGTTGATACTGAATTAAATCAAGCGAAAACAAATGTCGATCAA
TCATCAACAAATGAATATGTTGATAATGCAGTTAAAGAAGGAAAAGCTAAAATTAATGCA
GTTAAAACATTTAGTGAGTACAAAAAAGATGCTTTAGCTAAAATTGAAGATGCATATAAT
GCTAAAGTAAACGAAGCGGATAACTCTAACGCATCGACTTCAAGTGAAATTGCTGAAGCG
AAACAAAAACTTGCTGAATTAAAACAAACTGCGGATCAAAATGTTAATCAAGCTACTTCT
AAAGATGACATTGAAGTTCAAATTCATAATGACTTAGATAATATTAACGATTACACAATT
CCAACAGGTAAAAAAGAATCAGCTACAACAGATTTATATGCTTATGCAGATCAGAAGAAA
AATAATATTTCAGCTGACACTAATGCAACACAAGATGAAAAGCAACAAGCAATTAAGCAA
GTTGACCAAAATGTTCAAACTGCATTAGAAAACATTAATAATGGTGTGGATAATGGTGAC
GTTGATGATGCATTAACACAAGGTAAAGCAGCAATTGATACTATTCAAGTAGATGCTACT
GTTAAACCTAAAGCGAACCAAGCTATTGAAGCTAAAGCAGAAGATACGAAAGAATCAATT
GATCATAGTGACCAGTTAACTGCTGAAGAAAAAACTGAAGCATTAGCAATGATTAAACAA
ATTACAGATCAAGCTAAACAAGGTATTACTGATGCAACAACAACTGCTGAAGTTGAAAAA
GCGAAAGCTCAAGGACTTGAGGCATTTGATAACATTCAAATTGACTCAACAGAAAAACAA
AAAGCTATCGAAGAATTAGAAACTGCACTAGACCAGATTGAAGCAGGTGTAAATGTCGAC
GCTGATGCTACAACTGAAGAAAAAGAAGCGTTTACGAATGCTTTAGAAGACATTTTATCA
AAAGCAACTGAAGATATTTCTGATCAAACTACAAATGCAGAAATCGCTACTGTCAAAAAT
AGTGCGCTTGAACAACTTAAAGCACAACGTATTAATCCAGTAGTTAAGAAAAATGCTTTG
GAAGCAATTAGAGAAGTGGTTAACAAGCAAATAGAAATAATTAAAAATGCAGATGCAGAT
GCATCGGCGAAAGAAATTGCACGTACAGATTTAGGTAGATATTTTGACAGATTTGCTGAT
AAATTAGATAAAACACAAACAAATACAGAGGTTGCTGAATTACAAAATGTAACGATACCT
GCAATTGAAGCGATTGTGCCTCAGAATGATCCAGATGCTAATGATACTAATAATGGTACA
GATAATAATGATGCAACAGCAAATTCAAATGCTAATGCAACACCAGAAAACACTGGACAA
CCTAACGTATCTGAGACGACAGATAATGGCAAAGCAGACGCTTCTCCGACAACACCAAAT
AATAGTGATGCGGCAACAGGTGAAACAACAGTAACATCAGCAACTGATGATGCAAAGGAT
AAACCGCAAGCTAATAACAATTCTAGTGCAGATGCATCAACAAACAGTCCGACAATGGAT
AACGATGTAACTAGTAAACCAGAAGTAGAATCAACTAATAACGGCACAACTGATAAACCT
GTAACAGAAACAGATAATGCAACGCCAGCAGAAAGCACAACAAATAACAATAGTACAACT
ACAGCAACAAACGAGAATGCACCAACAGGATCAACAGCAACGGCTCCAACAACTGCGAGC
ACAGAAGCAGCATCATCTGCTGATAGTAAAGATAATGCATCTGTAAATGATTCAAAACAA
AATGCTGAAGTAAATAATAGTGCTGAATCTCAATCAACTAATGGCAAGGTTGCACAACCA
AAATCTGAAAATAAAGCTAAGGCAGAAAAAGATGGTAGAGATTCAACAAATCAAAGTATG
GTTGAATCAACAACTGAAACATTGCCTTCAGCAGACATAACAGAACCAAATGTACCTTCT
AATACATCAAAAGATAAAGAAGAAAGTACGACAAATCAAACTGATGCAGGACAACTTAAG
TCTGAAACTAACGTTGCATCTAACGAAGCAGATAAATCGCCAAGCAAAGCTGATACTGAA
GTTTCGAATAAACCATCAACATCTGCATCTTCTGAAGCAAAAGATAAAATGACTTCAACT
AATGTTAGCCAAAAAGATGATACGGCAACAGCAGATACTAATGATACGCAAAAATCAGTT
GGCCCAGTTGCAAACAATAAAGCTAAAGATATGCAAACTAATGATACGCAAAAATCAGTT
GGTTCAGCTGCAAACAATAAAGCTACGCAAAACGACGGTGCCAATGCATCTCCAGCAACA
GTTTCAAATGGTAGTCATAGTATGCATCAAGATATGCTTAATGTAACTAAGCCTGAAGAA
AACAAAGCAAATGCAAAATCAGACCAACAAGGAAAAGTTAATAAGCCTAAACAACAAGCT
AAAACTTTACCAGATACTGGTATGTCACATAATGACGATTTACCATATGCTGAATTAGCT
CTAGGTGCAGGTATGGCATTCTTAATTAGAAGATTCACTAAGAAAGACCAACAAACTGAA
GAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS11270 [old locus tag: SA1964 ]
- symbol: SA_RS11270
- description: FmtB protein
- length: 2481
- theoretical pI: 4.32215
- theoretical MW: 263765
- GRAVY: -0.822048
⊟Function[edit | edit source]
- TIGRFAM: SasC/Mrp/FmtB intercellular aggregation domain (TIGR04263; HMM-score: 399)and 2 moregram-positive signal peptide, YSIRK family (TIGR01168; HMM-score: 41.6)Cell envelope Other LPXTG cell wall anchor domain (TIGR01167; HMM-score: 14.9)
- TheSEED: see SA1964
- PFAM: B_GA (CL0598) DUF1542; Domain of Unknown Function (DUF1542) (PF07564; HMM-score: 814.6)and 2 moreno clan defined YSIRK_signal; YSIRK type signal peptide (PF04650; HMM-score: 33)GRP; Glycine rich protein family (PF07172; HMM-score: 11.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cellwall
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 10
- Extracellular Score: 0
- Internal Helices: 0
- LocateP:
- SignalP: Signal peptide SP(Sec/SPI) length 38 aa
- SP(Sec/SPI): 0.95798
- TAT(Tat/SPI): 0.037886
- LIPO(Sec/SPII): 0.001756
- Cleavage Site: CS pos: 38-39. ASA-AE. Pr: 0.9061
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNLFRQQKFSIRKFNVGIFSALIATVTFISTNPTTASAAEQNQPAQNQPAQPADANTQPNANAGAQANPAAQPANQGGQANPAGGAAQPAGQGNQADPNNAAQAQPGNQAAPANQAGQGNNQATPNNNATPANQTQPANAPAAAQPAAPVAANAQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPTVTVTDKVNGYSLINNGKIGFVNSELRRSDMFDKNNPQNYQAKGNVAALGRVNANDSTDHGNFNGITKTVNVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPTDADRLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKATNNKEYTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNDSLTTTFPNGNEDSTVLKNMTVNYDQTANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNVANIDTPKNIDFNEKLTYRTASDVVINNAQPEVTLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAEYNKLKQQADTILNEDANHVETANRASQADIDGLVTKLQAALIDNQAAIAELDTKAQEKVTAAQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTSQGVTTEKDNGIAVLEQDVITPTVKPQAKQDIIQAVTTRKQQIKKSNASLQDEKDVANDKIGKIETKAIKDIDAATTNAQVEAIKTKAINDINQTTPATTAKAAALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIERINAAKVSGVKAIEATTTAQDLERVKNEEIFKIENITDSTQTKMDAYKEVRQAATARKAQNATVSNATDEEVAEANAAVDAAQTEGLHDIQVVKSQQEVADTKAKVLDKINAIQTQAKVKPAADTEVENAYNTRKQEIQNSNASTTEEKEAAYTELDAKKQEARTNLDAANTNSDVTTAKDNGIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTTEEQQAAKDKVDQAVVTANADIDNATANTDVDNAKTTNEATIAAITPDANVKPAAKQAIADKVQAQETAIDANNGSTTEEKEAAKQQVQTEKTAADAAIDAAHSNVEVEAAKNAEIAKIEAIQPATTTKDNAKQAIATKANERKTAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQAKTTGETSIDQVTPTVNKKATARNEITAILNNKLQEIQATPDATDEEKQAADAEANTENGKANQAISAATTNAQVDEAKANAEAAINAVTPKVVKKQAAKDEIDQLQATQTNVINNDQNATNEEKEAAIQQLATAVTDAKNNITAATDDNGVDTAKDAGKNSIQSTQPATAVKSNAKNEVDQAVTTQNQAIDNTTGATTEEKNAAKDLVLKAKEKAYQDILNAQTTNDVTQIKDQAVADIQGITADTTIKDVAKDELATKANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDPIQASTDVKTNARAELLTEMQNKITEILNNNETTNEEKGNDIGPVRAAYEEGLNNINAATTTGDVTTAKDTAVQKVQQLHANPVKKPAGKKELDQAAADKKTQIEQTPNASQQEINDAKQEVDTELNQAKTNVDQSSTNEYVDNAVKEGKAKINAVKTFSEYKKDALAKIEDAYNAKVNEADNSNASTSSEIAEAKQKLAELKQTADQNVNQATSKDDIEVQIHNDLDNINDYTIPTGKKESATTDLYAYADQKKNNISADTNATQDEKQQAIKQVDQNVQTALENINNGVDNGDVDDALTQGKAAIDTIQVDATVKPKANQAIEAKAEDTKESIDHSDQLTAEEKTEALAMIKQITDQAKQGITDATTTAEVEKAKAQGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVDADATTEEKEAFTNALEDILSKATEDISDQTTNAEIATVKNSALEQLKAQRINPVVKKNALEAIREVVNKQIEIIKNADADASAKEIARTDLGRYFDRFADKLDKTQTNTEVAELQNVTIPAIEAIVPQNDPDANDTNNGTDNNDATANSNANATPENTGQPNVSETTDNGKADASPTTPNNSDAATGETTVTSATDDAKDKPQANNNSSADASTNSPTMDNDVTSKPEVESTNNGTTDKPVTETDNATPAESTTNNNSTTTATNENAPTGSTATAPTTASTEAASSADSKDNASVNDSKQNAEVNNSAESQSTNGKVAQPKSENKAKAEKDGRDSTNQSMVESTTETLPSADITEPNVPSNTSKDKEESTTNQTDAGQLKSETNVASNEADKSPSKADTEVSNKPSTSASSEAKDKMTSTNVSQKDDTATADTNDTQKSVGPVANNKAKDMQTNDTQKSVGSAANNKATQNDGANASPATVSNGSHSMHQDMLNVTKPEENKANAKSDQQGKVNKPKQQAKTLPDTGMSHNDDLPYAELALGAGMAFLIRRFTKKDQQTEE
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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