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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004320000
- symbol?: citZ
- synonym:
- description?: citrate synthase
- citrate synthase
- methylcitrate synthase
- citrate (Si)-synthase
- Citrate synthase (si)
- citrate synthase 2 (Citrate synthase II)
- citrate synthase II
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4561797..4562654
- synteny block?: BlockID0033440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1654 (citZ)
08BA02176:
C248_1737 (citZ)
11819-97:
MS7_1702 (citZ)
6850:
RSAU_001553
71193:
ST398NM01_1749
ECT-R 2:
ECTR2_1535
ED133:
SAOV_1683 (citZ)
ED98:
SAAV_1685 (gltA)
HO 5096 0412:
SAEMRSA15_16050 (citZ)
JH1:
SaurJH1_1786
JH9:
SaurJH9_1752
JKD6008:
SAA6008_01662 (citZ)
JKD6159:
SAA6159_01619 (citZ)
LGA251:
SARLGA251_15870 (citZ)
M013:
M013TW_1708
MRSA252:
SAR1774 (citZ)
MSHR1132:
SAMSHR1132_15460
MSSA476:
SAS1623
Mu3:
SAHV_1681 (citZ)
Mu50:
SAV1695 (citZ)
MW2:
MW1639 (citZ)
RF122:
SAB1554c (citZ)
ST398:
SAPIG1749
T0131:
SAT0131_01797
TCH60:
HMPREF0772_11456 (gltA)
TW20:
SATW20_16850 (citZ)
USA300_TCH1516:
USA300HOU_1682 (citZ)
VC40:
SAVC_07680
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEEVIFLLWNYRLPNEEEL
N315 MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEEVIFLLWNYRLPNEEEL
NCTC8325 ------------------------------------------------------------
Newman MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEEVIFLLWNYRLPNEEEL
USA300_FPR3757 MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEEVIFLLWNYRLPNEEEL
COL AHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYIAHFDPDAENESDENRYER
N315 AHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYIAHFDPDAENESDENRYER
NCTC8325 ----------------------------MHPMTALRTSLSYIAHFDPDAENESDENRYER
Newman AHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYIAHFDPDAENESDENRYER
USA300_FPR3757 AHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYIAHFDPDAENESDENRYER
:*******************************
COL AMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYMLRGELPTDIEVEAFNKALIL
N315 AMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYMLRGELPTDIEVEAFNKALIL
NCTC8325 AMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYMLRGELPTDIEVEAFNKALIL
Newman AMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYMLRGELPTDIEVEAFNKALIL
USA300_FPR3757 AMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYMLRGELPTDIEVEAFNKALIL
************************************************************
COL HADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPLHGGANEQVMTMLSEIGSIENVD
N315 HADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPLHGGANEQVMTMLSEIGSIENVD
NCTC8325 HADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPLHGGANEQVMTMLSEIGSIENVD
Newman HADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPLHGGANEQVMTMLSEIGSIENVD
USA300_FPR3757 HADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPLHGGANEQVMTMLSEIGSIENVD
************************************************************
COL AYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSRQITKDAGREELFEMSVKMEKRMAE
N315 AYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSRQITKDAGREELFEMSVKMEKRMAE
NCTC8325 AYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSRQITKDAGREELFEMSVKMEKRMAE
Newman AYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSRQITKDAGREELFEMSVKMEKRMAE
USA300_FPR3757 AYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSRQITKDAGREELFEMSVKMEKRMAE
************************************************************
COL EKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSRSAGWIAHILEQYKDNRIMRPRAKYIG
N315 EKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSRSAGWIAHILEQYKDNRIMRPRAKYIG
NCTC8325 EKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSRSAGWIAHILEQYKDNRIMRPRAKYIG
Newman EKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSRSAGWIAHILEQYKDNRIMRPRAKYIG
USA300_FPR3757 EKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSRSAGWIAHILEQYKDNRIMRPRAKYIG
************************************************************
COL ETNRKYIPLEERK
N315 ETNRKYIPLEERK
NCTC8325 ETNRKYIPLEERK
Newman ETNRKYIPLEERK
USA300_FPR3757 ETNRKYIPLEERK
*************