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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005861000
- symbol?: tcaA
- synonym:
- description?: zinc ribbon domain-containing protein
- zinc ribbon domain-containing protein
- tcaA protein
- teicoplanin resistance-associated membrane protein, putative
- teicoplanin resistance associated membrane protein TcaA protein
- teicoplanin resistance associated protein A
- membrane-associated protein TcaA
- teicoplanin resistance associated membrane protein
- teicoplanin resistance protein TcaA
- bicyclomycin and teicoplanin resistance protein
- Teicoplanin resistance associated membrane protein TcaA
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5936152..5937534
- synteny block?: BlockID0046060
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2295 (tcaA)
08BA02176:
C248_2401 (tcaA)
11819-97:
MS7_2374 (tcaA)
6850:
RSAU_002190 (tcaA)
71193:
ST398NM01_2409
ECT-R 2:
ECTR2_2216
ED133:
SAOV_2400c
ED98:
SAAV_2421 (tcaA)
HO 5096 0412:
SAEMRSA15_22540 (tcaA)
JH1:
SaurJH1_2426
JH9:
SaurJH9_2380
JKD6008:
SAA6008_02393 (tcaA)
JKD6159:
SAA6159_02260 (tcaA)
LGA251:
SARLGA251_21380 (tcaA)
M013:
M013TW_2314
MRSA252:
SAR2442 (tcaA)
MSHR1132:
SAMSHR1132_21810
MSSA476:
SAS2247
Mu3:
SAHV_2340 (tcaA)
Mu50:
SAV2356 (tcaA)
MW2:
MW2277 (tcaA)
RF122:
SAB2235c (tcaA)
ST398:
SAPIG2409
T0131:
SAT0131_02543
TCH60:
HMPREF0772_10837 (tcaA)
TW20:
SATW20_24870 (tcaA)
USA300_TCH1516:
USA300HOU_2338 (tcaA)
VC40:
SAVC_10640
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKSCPKCGQQAQDDVQICTQCGHKFDSRQAFYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
N315 MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
NCTC8325 MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
Newman MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
USA300_FPR3757 MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
******************************:*****************************
COL ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
N315 ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
NCTC8325 ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
Newman ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
USA300_FPR3757 ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
************************************************************
COL EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
N315 EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
NCTC8325 EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
Newman EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
USA300_FPR3757 EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
************************************************************
COL QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
N315 QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFILGTYRIPAMKSTENGDFAGYLKF
NCTC8325 QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
Newman QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
USA300_FPR3757 QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
************************************* ******************:***
COL DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNK
N315 DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNK
NCTC8325 DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNK
Newman DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNK
USA300_FPR3757 DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNK
*********************:********************:*****************
COL DITISASGKAKDKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
N315 DITISASGKAKGKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
NCTC8325 DITISASGKAKDKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
Newman DITISASGKAKDKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
USA300_FPR3757 DITISASGKAKDKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
***********.************************************************
COL IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
N315 IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
NCTC8325 IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
Newman IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
USA300_FPR3757 IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
************************************************************
COL GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
N315 GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
NCTC8325 GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
Newman GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
USA300_FPR3757 GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
****************************************