NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_0227 [new locus tag: NWMN_RS01265 ]
- pan locus tag?: SAUPAN001188000
- symbol: NWMN_0227
- pan gene symbol?: esxD
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_0227 [new locus tag: NWMN_RS01265 ]
- symbol: NWMN_0227
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 287221..287538
- length: 318
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 5330070 NCBI
- RefSeq: YP_001331261 NCBI
- BioCyc:
- MicrobesOnline: 3705758 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
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241
301ATGACGTTGAGTGGAAAAATTAGTGTTAAAGCTGAAACGATTGCACATGTTGTAAAAGAA
TTGGAAAGCATAAGTCAAAAGTATGATGAAATAGCTCAAAACTTTGGAAAAATAGCGCAA
TTAAATTACTACAGTAGTGAAAAAGCTGCACATTCTATGGAAAATGGCTATAGTAGTGCT
GCAACAGTCATTAGTGGTCTCAAAGGTCCATTGAGTACACTCGGTGGTGGCGTCATGAAT
TCAGCACAAAAGTTCTTTGAAGCAGATGAACATTGGGGTACGGAATTTGCCAAGCTTTAC
TATAATATTGAGGGATAG60
120
180
240
300
318
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_0227 [new locus tag: NWMN_RS01265 ]
- symbol: NWMN_0227
- description: hypothetical protein
- length: 105
- theoretical pI: 5.61271
- theoretical MW: 11414.7
- GRAVY: -0.28381
⊟Function[edit | edit source]
- TIGRFAM: WXG100 family type VII secretion target (TIGR03930; HMM-score: 13)
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- PFAM: no clan defined Dynactin_p22; Dynactin subunit p22 (PF07426; HMM-score: 13)DUF5098; Domain of unknown function (DUF5098) (PF17023; HMM-score: 11.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTLSGKISVKAETIAHVVKELESISQKYDEIAQNFGKIAQLNYYSSEKAAHSMENGYSSAATVISGLKGPLSTLGGGVMNSAQKFFEADEHWGTEFAKLYYNIEG
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊞Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊞Other Information[edit | edit source]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Mark Anderson, Khaled A Aly, Yi-Hsing Chen, Dominique Missiakas
Secretion of atypical protein substrates by the ESAT-6 secretion system of Staphylococcus aureus.
Mol Microbiol: 2013, 90(4);734-43
[PubMed:24033479] [WorldCat.org] [DOI] (I p)