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NCBI: 06-JUL-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_0316 [new locus tag: NWMN_RS01805 ]
  • pan locus tag?: SAUPAN001855000
  • symbol: NWMN_0316
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_0316 [new locus tag: NWMN_RS01805 ]
  • symbol: NWMN_0316
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 366725..367726
  • length: 1002
  • essential: unknown other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    TTGGTTAAATTAAGCGTATTAGACTATGCCTTAATAGATGAAGGTAAGGATGCACAAAAG
    GCATTGCAAGATTCAGTGACACTTGCAAAATTAGCAGATCGACTTGGCTTTAAGCGAATT
    TGGTTTACGGAACATCATAATGTACCAGCGTTTGCGTGTAGTAGTCCAGAACTTTTGATG
    ATGCATACATTGGCGCAGACAAATCACATACGAGTTGGCTCTGGTGGTGTGATGCTGCCG
    CACTATCGACCTTATAAAATTGCTGAGCATTTTAGAATGATGGCAGCGTTATATCCAAAT
    CGTATTGATTTAGGTATTGGTAATAATCCAGGTACTACTATGGTAAAGCAAGCTTTAGAT
    GGAATAAATCCTACATATGATAGTTACGATGAATCGATTTCGTTATTACGTGATTATCTT
    ACAATAAAGGATAAACCAAGTGCGCATACGTTAGGTGTCCAACCACACATTGATCATTTT
    CCAGAAATGTGGTTATTAAGTAGTAGCGCAACATCTGCCAAAATAGCTGCCGAACTAGGT
    ATAGGGCTTTCTGTTGGAACATTTTTGCTACCAGATATAAATGCGATACATGCAGCGAAG
    GATAACATTGATATTTACAAAAAACATTTCCAAGCATCAACGATTAAAATGGACGCAAAG
    GTGATGGCATCTGTATTTGTCATTGTAGCTGATAACGAAGCGGAAGTAGCAGCATTACAA
    CATGCCTTAGATGTTTGGTTATTAGGTAAATTACAATTTGCAGAATTTGAAGATTTTCCT
    TCAGTAGACACAGCACAAAAGTATAAGCTTAATGATCGAGACAAAGAGATGATTCAAGCA
    CATCAAGCACGCATCATTGCAGGTACACAAGAAAAGGTTAAAGCACAATTAGATGATTTC
    ATTGCTACGTTTGAAGTTGATGAGGTGTTAGTAGCACCGCTTATTCCAGGTATTGAACAG
    CGTTGTAAAACATTAAAATTACTCGCGGAAATTTATTTGTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1002

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_0316 [new locus tag: NWMN_RS01805 ]
  • symbol: NWMN_0316
  • description: hypothetical protein
  • length: 333
  • theoretical pI: 6.18693
  • theoretical MW: 37069.5
  • GRAVY: -0.0318318

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Unknown functionEnzymes of unknown specificityluciferase family oxidoreductase, group 1 (TIGR03558; EC 1.-.-.-; HMM-score: 349.7)
    Unknown functionEnzymes of unknown specificityputative FMN-dependent luciferase-like monooxygenase, KPN_01858 family (TIGR04027; EC 1.-.-.-; HMM-score: 48.7)
    natural product biosynthesis luciferase-like monooxygenase domain (TIGR04020; EC 1.-.-.-; HMM-score: 42.8)
    Unknown functionEnzymes of unknown specificityputative luciferase-like monooxygenase, FMN-dependent, CE1758 family (TIGR04036; EC 1.-.-.-; HMM-score: 41.2)
    probable oxidoreductase, LLM family (TIGR03858; EC 1.-.-.-; HMM-score: 37.6)
    Unknown functionEnzymes of unknown specificityprobable F420-dependent oxidoreductase, MSMEG_3544 family (TIGR03854; HMM-score: 34.4)
    Unknown functionEnzymes of unknown specificityprobable F420-dependent oxidoreductase, Rv3093c family (TIGR03841; EC 1.-.-.-; HMM-score: 33.5)
    Unknown functionEnzymes of unknown specificityprobable F420-dependent oxidoreductase, MSMEG_4141 family (TIGR03620; HMM-score: 28.5)
    TAT-translocated F420-dependent dehydrogenase, FGD2 family (TIGR04465; EC 1.-.-.-; HMM-score: 26.6)
    Unknown functionEnzymes of unknown specificityF420-dependent oxidoreductase, MSMEG_4879 family (TIGR03564; EC 1.-.-.-; HMM-score: 25.9)
    Unknown functionEnzymes of unknown specificityprobable F420-dependent oxidoreductase, Rv2161c family (TIGR03619; EC 1.-.-.-; HMM-score: 24.9)
    MetabolismEnergy metabolismMethanogenesis5,10-methylenetetrahydromethanopterin reductase (TIGR03555; EC 1.5.98.2; HMM-score: 24.4)
    MetabolismEnergy metabolismPentose phosphate pathwayglucose-6-phosphate dehydrogenase (coenzyme-F420) (TIGR03554; EC 1.1.98.2; HMM-score: 22.9)
    Unknown functionEnzymes of unknown specificityluciferase-type oxidoreductase, BA3436 family (TIGR03571; EC 1.-.-.-; HMM-score: 22.2)
    Unknown functionEnzymes of unknown specificityprobable F420-dependent oxidoreductase, MSMEG_2249 family (TIGR03857; HMM-score: 20.8)
    Unknown functionEnzymes of unknown specificityF420-dependent oxidoreductase, CPS_4043 family (TIGR03842; HMM-score: 18.3)
    Unknown functionEnzymes of unknown specificityprobable F420-dependent oxidoreductase, MSMEG_2516 family (TIGR03621; HMM-score: 16.5)
    Unknown functionEnzymes of unknown specificityprobable F420-dependent oxidoreductase, Rv3520c family (TIGR03559; HMM-score: 14.4)
    Unknown functionEnzymes of unknown specificityprobable F420-dependent oxidoreductase, Rv1855c family (TIGR03560; HMM-score: 14)
    Unknown functionEnzymes of unknown specificitycoenzyme F420-dependent oxidoreductase, NP1902A family (TIGR04024; EC 1.14.-.-; HMM-score: 12.4)
    Unknown functionEnzymes of unknown specificityFMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family (TIGR03860; EC 1.-.-.-; HMM-score: 12.2)
  • TheSEED:  
    Luciferase-like monooxygenase (EC 1.14.-.-) 
  • PFAM:
    no clan definedBac_luciferase; Luciferase-like monooxygenase (PF00296; HMM-score: 106.2)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 0.83
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.119
    • Ymax_pos: 21
    • Cmax: 0.141
    • Cmax_pos: 53
    • Smax: 0.178
    • Smax_pos: 18
    • Smean: 0.103
    • D: 0.113
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLMMHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALDGINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHFPEMWLLSSSATSAKIAAELGIGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQHALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDFIATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]