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Summary[edit source | edit]

  • pan ID?: SAUPAN001855000
  • symbol?:
  • description?: LLM class flavin-dependent oxidoreductase

      descriptions from strain specific annotations:

    • LLM class flavin-dependent oxidoreductase
    • alkanal monooxygenase (FMN-linked)
    • bacterial luciferase
    • bacterial luciferase family protein
    • luciferase family protein
    • Luciferase-like monooxygenase
    • luciferase-like monooxygenase family protein
    • luciferase oxidoreductase, group 1 family protein
    • putative luciferase family protein
  • strand?: +
  • coordinates?: 2353733..2354734
  • synteny block?: BlockID0012300
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0322
    08BA02176:
    C248_0376
    11819-97:
    MS7_0313
    71193:
    ST398NM01_0403
    ECT-R 2:
    ECTR2_283
    ED133:
    SAOV_0349
    ED98:
    SAAV_0291
    HO 5096 0412:
    SAEMRSA15_02790
    JH1:
    SaurJH1_0382
    JH9:
    SaurJH9_0372
    JKD6008:
    SAA6008_00300
    JKD6159:
    SAA6159_00299
    LGA251:
    SARLGA251_02850
    M013:
    M013TW_0304
    MRSA252:
    SAR0320
    MSHR1132:
    SAMSHR1132_02970
    MSSA476:
    SAS0300
    Mu3:
    SAHV_0320
    Mu50:
    SAV0323
    MW2:
    MW0300
    RF122:
    SAB0273
    ST398:
    SAPIG0403
    T0131:
    SAT0131_00328
    TCH60:
    HMPREF0772_10172
    TW20:
    SATW20_03910
    USA300_TCH1516:
    USA300HOU_0344
    VC40:
    SAVC_01365

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLM
    N315            MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLM
    NCTC8325        MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLM
    Newman          MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLM
    USA300_FPR3757  MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTEHHNVPAFACSSPELLM
                    ************************************************************

    COL             MHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALD
    N315            MHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALD
    NCTC8325        MHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALD
    Newman          MHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALD
    USA300_FPR3757  MHTLAQTNHIRVGSGGVMLPHYRPYKIAEHFRMMAALYPNRIDLGIGNNPGTTMVKQALD
                    ************************************************************

    COL             GINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHFPEMWLLSSSATSAKIAAELG
    N315            GINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHFPEMWLLSSSATSAKIAAELG
    NCTC8325        GINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHFPEMWLLSSSATSAKIAAELG
    Newman          GINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHFPEMWLLSSSATSAKIAAELG
    USA300_FPR3757  GINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHFPEMWLLSSSATSAKIAAELG
                    ************************************************************

    COL             IGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
    N315            IGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
    NCTC8325        IGLSVGTFLLPDINAIHTAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
    Newman          IGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
    USA300_FPR3757  IGLSVGTFLLPDINAIHAAKDNIDIYKKHFQASTIKMDAKVMASVFVIVADNEAEVAALQ
                    *****************:******************************************

    COL             HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDF
    N315            HALDVWLLGKLQFAEFEHFPSVDTAQKYKLNDRDKEMIQVHQARIIAGTQEQVKAQLDDF
    NCTC8325        HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDF
    Newman          HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDF
    USA300_FPR3757  HALDVWLLGKLQFAEFEDFPSVDTAQKYKLNDRDKEMIQAHQARIIAGTQEKVKAQLDDF
                    *****************.*********************.***********:********

    COL             IATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL
    N315            IATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL
    NCTC8325        IATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL
    Newman          IATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL
    USA300_FPR3757  IATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL
                    *********************************