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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS08745 [old locus tag: NWMN_1560 ]
  • pan locus tag?: SAUPAN004278000
  • symbol: NWMN_RS08745
  • pan gene symbol?:
  • synonym:
  • product: aminopeptidase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS08745 [old locus tag: NWMN_1560 ]
  • symbol: NWMN_RS08745
  • product: aminopeptidase
  • replicon: chromosome
  • strand: -
  • coordinates: 1726291..1727364
  • length: 1074
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (1726291..1727364) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGCAATGATATATAGAAATAATTTCATTGTGTTCGTTTTATCATTTTTTATTAGTATT
    CTACTGTATTCATCGCACGTATTACTTCCATTTATGTTTGGTCCTATTATCGCATCAATC
    ATTTGTGTAAAAGTTTTCAAACTTGATATTAAATGGCCATTCTTACTTAGTGAATTAGGT
    ATTGTACTATTAGGTGTGCAAATCGGATCAACGTTTACGAAAAATGTCGTTATGGATATT
    AAAAACAATTGGCTTTCGATTATTGTTGTATCTATTTCGATATTATTAATTGCAATAGTA
    ATGGCATTTGTTTTTAAAAAAATTGCACGTATTAATACAGAAACAGCTATTTTAAGTGTT
    ATACCAGGAGCACTAACACAAATGCTGGTCATGGCTGAACAAGACAAACGTGCTAATTTG
    TTAGTTGTTAGCTTAACGCAAACATCACGAATTATATTTGTTGTTGTTTTAGTACCGTTC
    ATTTCATATTTTTTTCATGATGGTAACATGCATGCGAATGGAAAGTTAACAAAAGTCTTG
    CCTTTATCACAAGTATTAAACATAGGGCAAATAGTTATTTTAGCGATAGCTATCTTTATA
    GTTTATCTAATTATGTCTAAAATAAAGTTTCCAACATTTCAATTATTAGCACCACTCATT
    GTATTAATTGTTTGGAATTTTTCTACAGGTTTAACATTTACACTAGATCATTGGTTGTTG
    AACATGGCACAACTAATATATATGATTAGAATTGGAGTTCAAATTGCGCATTTATTGTCA
    GATTTAAAAGGTAGACTAGCAATCGCAATTACAATTCAAAATATTATGTTGATAATTGGT
    GCGCTAATCATGGTTTATATCATACATTTCTTTGATAATAATCCTATTAATGAATTGTTT
    CTTGGTGCAGCACCAGGAGGGGTTAATCAGATAGTTTTAGTTGCATTAGCTACTGGTGCC
    GATGTTGCTATGATTACGAGTTATCATATTTTCCGAATCTTTTTCATCCTATTTATTATT
    GCACCAGGAATTAATTACTTTTTAAAATATCGTTCGAATAAGCGTGAAGATTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1074

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS08745 [old locus tag: NWMN_1560 ]
  • symbol: NWMN_RS08745
  • description: aminopeptidase
  • length: 357
  • theoretical pI: 10.1975
  • theoretical MW: 40065.4
  • GRAVY: 1.08796

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    membrane protein AbrB duplication (TIGR03082; HMM-score: 238.7)
  • TheSEED:
  • PFAM:
    Membrane_trans (CL0142) AbrB; Transition state regulatory protein AbrB (PF05145; HMM-score: 257)
    CPA_AT (CL0064) Asp-Al_Ex; Predicted Permease Membrane Region (PF06826; HMM-score: 22.9)
    Actin_ATPase (CL0108) BcrAD_BadFG; BadF/BadG/BcrA/BcrD ATPase family (PF01869; HMM-score: 13.3)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 9
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.118
    • Ymax_pos: 13
    • Cmax: 0.124
    • Cmax_pos: 30
    • Smax: 0.165
    • Smax_pos: 2
    • Smean: 0.141
    • D: 0.127
  • predicted transmembrane helices (TMHMM): 10

Accession numbers[edit source | edit]

  • GI: 447163592 NCBI
  • RefSeq: WP_001240848 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MAMIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNMAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAAPGGVNQIVLVALATGADVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS08745 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]