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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS13840 [old locus tag: NWMN_2407 ]
  • pan locus tag?: SAUPAN006139000
  • symbol: NWMN_RS13840
  • pan gene symbol?:
  • synonym:
  • product: FUSC family protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS13840 [old locus tag: NWMN_2407 ]
  • symbol: NWMN_RS13840
  • product: FUSC family protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2648604..2650427
  • length: 1824
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (2648604..2650427) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGATTATTCCTGCAATAATCGGTTACTTATGTGGTAATTTCCAATTTGGATTATTAGTT
    GCAACCGGAACACTAGCCCATATTTATGTTTTTAAAGGTCCGTCGCGATCTAAGCTGCGA
    ACTGTAATAATTTGTAATTTAGCGTTTGCAATATGTATGATGCTTGGTACGCTAACAGCC
    AAAACGCCACTCGTTTTTGGAATGACATTATTAATTGTTACGGTTATACCATTTTATATA
    TTTACTGCCTTAAAAATAGCTGGACCGTCATCGACATTCTTCATTGTGACATTCAGTCTA
    CCCATTAACTTACCTATAGCTCCCGAAGAAGCATTATATAGAGGCTTTGCGATTTTAGTA
    GGCGGTATACTTGCCACTATGATGGTGTTAATCACGATCGTATTTTCTAAAAACAAAGCT
    GAAGAACAAGCAATTCAAAATGATTTTAAACTCATATCTAAGTTGTTACACACTTATAAT
    GATAAATCTGCTTTTTTACAAGTAGCAAAAACAGCGGTGGATAGTTTTAAAGCATCTGAT
    AAATTATTAATCACTTCTACTTCAAGTAACGATAAATTAAGTAGACGTTTCCAAAAATTA
    TTATTATTACACACATCTGCCCAAGGGATTTATTCTGAACTGTTAGAGTTGAACGCTAAA
    CAAATTCGACCATTGCCAGATGAGTTAATTGAAATGATGGATCATATCATTGCACAACTA
    GATAATAGTGAGGAAAATGTAAGATATTGGCGAAAAGAAGTGACAGTAACAGAGGAATTT
    CAAAATTTATTCAACCATATATTGAAAATTGATGAAATGGTGCATGCAAATGAAGCGCGT
    ATTGCGTATGAAGCAGACATGCGAAAACCTTTATATAGTAAACGCATTTATCAAAATTTA
    ACATTAGACTCTATTGTTTTTAGAAATACATTGAGATATACAGCGATTATGATGATAGCG
    ATATTTATTGCGTTAATGTTTGATTTTGAAAAAGCATACTGGATACCGTTATCTGCACAT
    ACAATATTACTAGGAACATCAACTATACATGCAATCGAGAGAGGTATGGCACGAGGTTTA
    GGTACTATTTTAGGTGTGTTAGTACTTTCAGTCATATTGTTGTTTTCAATACCAACACCT
    GTTGCAGTAATTTTAATGGGCATTGCAGCATTGTTTACTGAAGCATTGGTGGGAGCAAAT
    TATGCGATTGCAGTAGTTTTTATTACAATACAAGTTATTTTAATGAACGGATTAGCATCA
    CAGAATTTAACAATTAACATTGCGTTTCCAAGAGTTATTGACGTTGCAATGGGTATTGTG
    ATTGCAATCATAGGTTTATTTGTCCTTGGACAACGTACCGCATCCGCATTGCTTCCTAAT
    GTAATGGCTGAAGTTGTTCGTAAAGAAGCAACGCTCTTTCATTATTTATTTTCTGAAAAT
    CAATATAAAGATGATGTGTATCAGAAAAACACGGCTATGAACCTATCTGTGAAATTAAAT
    AACATGACGCAAGTTTATAATGCAGCTAATGGTGAATTATTTAGTGATAAGACATTGATT
    CAAAATTATTATCCTAGCTTATTCGCATTAGAAGAAATTAGCTTTATGTTAAATAGAGCC
    ATGGCTAATGAAGATAGACTTACAATAAATGAACAATTAATGGGCGAGTATTTAGCAATA
    TTTGAAAACATCGCTAAGCATTTCGAATTAAATACAGAATTAGAAATAAAGATATTACCA
    GATTTACCACAGTATAATTATATTCAATCAGCAATGATGAATATTCAACACAATGGTTTT
    CGTGAGAGAGACAAGAACGTTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1620
    1680
    1740
    1800
    1824

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS13840 [old locus tag: NWMN_2407 ]
  • symbol: NWMN_RS13840
  • description: FUSC family protein
  • length: 607
  • theoretical pI: 7.1178
  • theoretical MW: 68200.9
  • GRAVY: 0.400824

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    integral membrane protein, YccS/YhfK family (TIGR01667; HMM-score: 76.4)
    Cell structureCell envelopeOtherTIGR01666 family membrane protein (TIGR01666; HMM-score: 64.1)
  • TheSEED:
  • PFAM:
    FUSC (CL0307) FUSC_2; Fusaric acid resistance protein-like (PF13515; HMM-score: 62.2)
    FUSC; Fusaric acid resistance protein family (PF04632; HMM-score: 33.5)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 10
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.166
    • Ymax_pos: 61
    • Cmax: 0.176
    • Cmax_pos: 61
    • Smax: 0.266
    • Smax_pos: 48
    • Smean: 0.127
    • D: 0.151
  • predicted transmembrane helices (TMHMM): 9

Accession numbers[edit source | edit]

  • GI: 446508864 NCBI
  • RefSeq: WP_000586392 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLHTYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELNAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHANEARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPLSAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALVGANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASALLPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDKTLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLAIFENIAKHFELNTELEIKILPDLPQYNYIQSAMMNIQHNGFRERDKNV

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS13840 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]