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NCBI: 26-AUG-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0332 [new locus tag: SA_RS01905 ]
  • pan locus tag?: SAUPAN001883000
  • symbol: SA0332
  • pan gene symbol?: fepB
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA0332 [new locus tag: SA_RS01905 ]
  • symbol: SA0332
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 389929..391044
  • length: 1116
  • essential: no DEG other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGTGGTCTTTCAAATCAATGTTCAATACACCAGAAGATCCGGAAAAAGATGCGTATGAA
    TTTTATGGTAAAGTGCAACCAGGCATTACCACACCCACGCAAAAAACATGCAATTTCGTT
    GCGTTAGATTTGAAGTCAAAAGATAGAGATGCAATTAAGGCAATGTTTAAAAAGTGGACG
    GTTATGGCTGATCGTATGATGGATGGTGATACAGTTGGCAAGACGAGTAACAATCCTTTA
    ATGCCACCAGTAGATACCGGTGAATCGATAGGATTAGGTGCAAGCAAGTTAACGATTACC
    TTTGGGATTAGTAAGTCTTTGATGAAGAAAATTGGGTTATCTAGTAAAATTCCCGATGCC
    TTTAAAGATTTACCGCATTTTCCGAATGATCAGTTAATAGACGATTACAGCGATGGTGAT
    ATTATGATTCAAGCATGCTCAAATGATTCGCAAGTATCCTTTCATGCGGTTCATAATTTA
    GTTCGTCCATTTCGAGATATTGTTAAGGTACGTTGGGCGCAATCTGGTTTTATCTCTGCT
    AAAGGTAAGGAAACACCTAGAAATTTAATGGCATTTAAAGATGGAACAATTAATCCTAGA
    AAGAGTAATCAACTTAAAGATTATGTGTTTATTGATGACGGATGGGCGAAACATGGAACT
    TATTGTGTTGTCAGACGTATTCAAATACACATTGAAACGTGGGATCGTACTGCACTGGAA
    GAACAAGAGGCTACATTTGGTCGGAAACGACATAGTGGTGCGCCGTTAACAGGTGGGAAA
    GAGTTTGATGAAATTGACTTAAAAGCGAAAGATAGTCATGGCGAGTATATTATTGATAAA
    GATGCCCATACGAGACTAGCGAAAGAAGCAAATACGTCAATTTTACGTAGAGCCTTTAAT
    TATGTTGATGGTACGGATGACCGCACAGGTAACTTCGAAACAGGCTTGTTGTTCATTGCT
    TTTCAAAAAGCGACAAAACAATTTATCGATATACAAAATAATTTAGGTAGTAATGATAAA
    TTAAATGAATATATTACACATAGAGGTTCTGCTTCATTTTTAGTATTACCAGGTGTTAGT
    AAGGGAGGATACCTTGGTGAAACATTATTTGACTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1116

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA0332 [new locus tag: SA_RS01905 ]
  • symbol: SA0332
  • description: hypothetical protein
  • length: 371
  • theoretical pI: 7.68279
  • theoretical MW: 41631.9
  • GRAVY: -0.522102

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Tat-translocated enzyme (TIGR01412; HMM-score: 563.2)
    Dyp-type peroxidase family (TIGR01413; HMM-score: 330.6)
  • TheSEED:  
    Iron acquisition and metabolismIron acquisition and metabolism - no subcategoryFerrous iron transporter EfeUOB, low-pH-induced Ferrous iron transport peroxidase EfeB 
  • PFAM:
    Dim_A_B_barrel (CL0032) Dyp_perox; Dyp-type peroxidase family (PF04261; HMM-score: 390.6)
    no clan definedDUF4826; Domain of unknown function (DUF4826) (PF16108; HMM-score: 12.9)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Extracellular
    • Cytoplasmic Score: 0.1
    • Cytoplasmic Membrane Score: 0.14
    • Cellwall Score: 0.15
    • Extracellular Score: 9.6
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 1
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.122
    • Ymax_pos: 18
    • Cmax: 0.122
    • Cmax_pos: 18
    • Smax: 0.206
    • Smax_pos: 16
    • Smean: 0.119
    • D: 0.121
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MWSFKSMFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLKSKDRDAIKAMFKKWTVMADRMMDGDTVGKTSNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAFKDLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISAKGKETPRNLMAFKDGTINPRKSNQLKDYVFIDDGWAKHGTYCVVRRIQIHIETWDRTALEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEANTSILRRAFNYVDGTDDRTGNFETGLLFIAFQKATKQFIDIQNNLGSNDKLNEYITHRGSASFLVLPGVSKGGYLGETLFD

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator: SA1329 (Fur*)
    Fur* (TF) important in Iron homeostasis  RegPrecise

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]