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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS04340 [old locus tag: SACOL0844 ]
  • pan locus tag?: SAUPAN002712000
  • symbol: SACOL_RS04340
  • pan gene symbol?: secG
  • synonym:
  • product: protein-export membrane protein SecG

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS04340 [old locus tag: SACOL0844 ]
  • symbol: SACOL_RS04340
  • product: protein-export membrane protein SecG
  • replicon: chromosome
  • strand: +
  • coordinates: 871883..872116
  • length: 234
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (871883..872116) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    ATGCATACATTTTTAATCGTATTATTAATCATTGATTGTATTGCATTAATAACTGTTGTA
    CTACTCCAAGAAGGTAAAAGCAGTGGACTTTCAGGTGCCATCAGTGGTGGTGCTGAGCAG
    TTATTCGGTAAACAAAAACAACGTGGCGTCGATTTATTCTTAAATAGATTAACAATTATT
    TTATCAATATTATTTTTTGTACTTATGATTTGCATAAGTTATCTTGGTATGTAA
    60
    120
    180
    234

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS04340 [old locus tag: SACOL0844 ]
  • symbol: SACOL_RS04340
  • description: protein-export membrane protein SecG
  • length: 77
  • theoretical pI: 8.22953
  • theoretical MW: 8399.2
  • GRAVY: 1.17922

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Genetic information processingProtein fateProtein and peptide secretion and traffickingpreprotein translocase, SecG subunit (TIGR00810; HMM-score: 82.4)
  • TheSEED:
  • PFAM:
    no clan definedSecG; Preprotein translocase SecG subunit (PF03840; HMM-score: 83.7)
    DUF3852; Protein of unknown function (DUF3852) (PF12963; HMM-score: 14.6)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 2
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.198
    • Ymax_pos: 34
    • Cmax: 0.152
    • Cmax_pos: 34
    • Smax: 0.336
    • Smax_pos: 22
    • Smean: 0.204
    • D: 0.2
  • predicted transmembrane helices (TMHMM): 2

Accession numbers[edit source | edit]

  • GI: 446478906 NCBI
  • RefSeq: WP_000556760 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MHTFLIVLLIIDCIALITVVLLQEGKSSGLSGAISGGAEQLFGKQKQRGVDLFLNRLTIILSILFFVLMICISYLGM

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS04340 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]