From AureoWiki
Jump to: navigation, search
NCBI: 03-AUG-2016

Summary[edit source | edit]

  • organism: Staphylococcus aureus NCTC8325
  • locus tag: SAOUHSC_00755
  • pan locus tag?: SAUPAN002647000
  • symbol: SAOUHSC_00755
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SAOUHSC_00755
  • symbol: SAOUHSC_00755
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 738232..738552
  • length: 321
  • essential: no DEG other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    GTGGCTATAAAGCTAAGTTCAATTGACCAATTTGAACAGGTTATTGAGGAAAATAAATAT
    GTTTTTGTATTAAAACATAGTGAAACTTGTCCAATATCGGCAAATGCGTACGATCAATTT
    AATAAATTTTTATATGAACGCGATATGGACGGTTATTATTTGATTGTCCAACAAGAACGC
    GATTTGTCAGATTATATTGCTAAAAAAACGAACGTTAAACATGAATCACCTCAAGCATTT
    TATTTTGTAAATGGTGAAATGGTTTGGAATCGAGACCACGGTGATATCAATGTGTCGTCA
    TTAGCACAAGCAGAAGAATAA
    60
    120
    180
    240
    300
    321

Protein[edit source | edit]

Protein Data Bank: 3IV4

General[edit source | edit]

  • locus tag: SAOUHSC_00755
  • symbol: SAOUHSC_00755
  • description: hypothetical protein
  • length: 106
  • theoretical pI: 4.44331
  • theoretical MW: 12436.8
  • GRAVY: -0.557547

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Unknown functionEnzymes of unknown specificitybacillithiol system protein YtxJ (TIGR04019; HMM-score: 111.4)
  • TheSEED:  
    Uncharacterized protein YtxJ 
  • PFAM:
    Thioredoxin (CL0172) DUF2847; Protein of unknown function (DUF2847) (PF11009; HMM-score: 114.5)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 1
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.122
    • Ymax_pos: 37
    • Cmax: 0.151
    • Cmax_pos: 37
    • Smax: 0.157
    • Smax_pos: 35
    • Smean: 0.098
    • D: 0.113
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLAQAEE

Experimental data[edit source | edit]

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]