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Summary[edit source | edit]

  • pan ID?: SAUPAN001239000
  • symbol?: nanA
  • description?: N-acetylneuraminate lyase

      descriptions from strain specific annotations:

    • N-acetylneuraminate lyase
    • N-acetylneuraminate lyase (N-acetylneuraminic acidaldolase) (N-acetylneuraminate pyruvate-lyase) (Sialic acid lyase)(Sialate lyase) (Sialic acid aldolase)
    • putative N-acetylneuraminate lyase
  • strand?: -
  • coordinates?: 1524118..1524999
  • synteny block?: BlockID0007500
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0312 (nanA)
    N315:
    SA0304 (nanA)
    NCTC8325:
    Newman:
    NWMN_0257 (nanA)
    USA300_FPR3757:
    04-02981:
    SA2981_0314 (nanA)
    08BA02176:
    C248_0304
    11819-97:
    MS7_0305 (nanA)
    71193:
    ST398NM01_0328
    ECT-R 2:
    ECTR2_275
    ED133:
    SAOV_0268
    ED98:
    SAAV_0282 (nanA)
    HO 5096 0412:
    SAEMRSA15_02710
    JH1:
    SaurJH1_0305
    JH9:
    SaurJH9_0298
    JKD6008:
    SAA6008_00291 (nanA)
    JKD6159:
    SAA6159_00291 (nanA)
    LGA251:
    SARLGA251_02770
    M013:
    M013TW_0296
    MRSA252:
    SAR0312
    MSHR1132:
    SAMSHR1132_02890
    MSSA476:
    SAS0292
    Mu3:
    SAHV_0312 (nanA)
    Mu50:
    SAV0315 (nanA)
    MW2:
    MW0292 (nanA)
    RF122:
    SAB0252c
    ST398:
    SAPIG0328
    T0131:
    SAT0131_00319 (sirC)
    TCH60:
    HMPREF0772_10180 (nanA)
    TW20:
    SATW20_03200
    USA300_TCH1516:
    USA300HOU_0335 (nanA)
    VC40:
    SAVC_01325

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQK
    N315            MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQK
    NCTC8325        MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQK
    Newman          MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQK
    USA300_FPR3757  MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLYVNGSSGENFLLNTEQK
                    ************************************************************

    COL             KQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIR
    N315            KQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIR
    NCTC8325        KQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIR
    Newman          KQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIR
    USA300_FPR3757  KQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYDALSAVTPFYYPFTFEEIR
                    ************************************************************

    COL             DYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEKIVGVKYTAPNFFLLERIRKA
    N315            DYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEKIVGVKYTAPNFFLLERIRKA
    NCTC8325        DYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEKIVGVKYTAPNFFLLERIRKA
    Newman          DYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEKIVGVKYTAPNFFLLERIRKA
    USA300_FPR3757  DYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEKIVGVKYTAPNFFLLERIRKA
                    ************************************************************

    COL             FPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDSN
    N315            FPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDSN
    NCTC8325        FPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDSN
    Newman          FPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDSN
    USA300_FPR3757  FPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQHDSN
                    ************************************************************

    COL             DIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLIAKYDL
    N315            DIIETVLSMGIYPTLKEILRHRDIDAGLPKRPFKPFNEAHRQTLDQLIAKYDL
    NCTC8325        DIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLIAKYDL
    Newman          DIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLIAKYDL
    USA300_FPR3757  DIIETVLSMGIYPTLKEILRHRGIDAGLPKRPFKPFNEAHRQTLDQLIAKYDL
                    **********************.******************************