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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001978000
- symbol?: —
- synonym:
- description?: NDxxF motif lipoprotein
- NDxxF motif lipoprotein
- putative lipoprotein
- Lipoprotein, putative
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2445616..2446242
- synteny block?: BlockID0013310
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0377
08BA02176:
C248_0434
11819-97:
MS7_0368
6850:
RSAU_000321
71193:
ST398NM01_0455
ECT-R 2:
ECTR2_338
ED133:
SAOV_0401c
ED98:
SAAV_0345
HO 5096 0412:
SAEMRSA15_03310
JH1:
SaurJH1_0437
JH9:
SaurJH9_0426
JKD6008:
SAA6008_00378
JKD6159:
SAA6159_00353
LGA251:
SARLGA251_03390
M013:
M013TW_0358
MRSA252:
SAR0396
MSHR1132:
SAMSHR1132_03500
MSSA476:
SAS0355
Mu3:
SAHV_0375
Mu50:
SAV0378
MW2:
MW0354
RF122:
SAB0328c
ST398:
SAPIG0455
T0131:
SAT0131_00411
TCH60:
HMPREF0772_10117
TW20:
SATW20_04450
USA300_TCH1516:
USA300HOU_0401
VC40:
SAVC_01645
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDI
N315 MKKRLLLSTFLASALILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDI
NCTC8325 MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDI
Newman MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDI
USA300_FPR3757 MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDI
*************:**********************************************
COL SDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDL
N315 SDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDL
NCTC8325 SDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDL
Newman SDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDL
USA300_FPR3757 SDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDL
************************************************************
COL HFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKY
N315 HFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKY
NCTC8325 HFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKY
Newman HFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKY
USA300_FPR3757 HFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKY
************************************************************
COL AGDVNKKQQDKIKDFLKSKGIKSDVIDK
N315 AGDVNKKQQDKIKDFLKSKGIKSDVIDK
NCTC8325 AGDVNKKQQDKIKDFLKSKGIKSDVIDK
Newman AGDVNKKQQDKIKDFLKSKGIKSDVIDK
USA300_FPR3757 AGDVNKKQQDKIKDFLKSKGIKSDVIDK
****************************