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Summary[edit source | edit]

  • pan ID?: SAUPAN002650000
  • symbol?: pepT
  • description?: peptidase T

      descriptions from strain specific annotations:

    • peptidase T
    • M20 family peptidase T
    • putative peptidase T
    • Tripeptidase T
    • Tripeptide aminopeptidase
  • strand?: -
  • coordinates?: 3148280..3149509
  • synteny block?: BlockID0018850
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0806 (pepT)
    N315:
    SA0698 (pepT)
    NCTC8325:
    Newman:
    NWMN_0712 (pepT)
    USA300_FPR3757:
    04-02981:
    SA2981_0721 (pepT)
    08BA02176:
    C248_0830 (pepT)
    11819-97:
    MS7_0793
    71193:
    ST398NM01_0819
    ECT-R 2:
    ECTR2_693 (pepT)
    ED133:
    SAOV_0780c
    ED98:
    SAAV_0705 (pepT)
    HO 5096 0412:
    SAEMRSA15_06690 (pepT)
    JH1:
    SaurJH1_0784
    JH9:
    SaurJH9_0767
    JKD6008:
    SAA6008_00758 (pepT)
    JKD6159:
    SAA6159_00698 (pepT)
    LGA251:
    SARLGA251_06760 (pepT)
    M013:
    M013TW_0730
    MRSA252:
    SAR0797 (pepT)
    MSHR1132:
    SAMSHR1132_06880
    MSSA476:
    SAS0708
    Mu3:
    SAHV_0740 (pepT)
    Mu50:
    SAV0743 (pepT)
    MW2:
    MW0705 (pepT)
    RF122:
    SAB0695c (pepT)
    ST398:
    SAPIG0819 (pepT)
    T0131:
    SAT0131_00815
    TCH60:
    HMPREF0772_12440 (pepT)
    TW20:
    SATW20_08180 (pepT)
    USA300_TCH1516:
    USA300HOU_0770 (pepT)
    VC40:
    SAVC_03350

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKNQLIDRLTRYTTIDTQSDPKSTTTPSTEKQWDLLHLLEKELQQLGLPTDLDENGYLFA
    N315            MKNQLIDRLTRYTTIDTQSDPKSTTTPSTEKQWDLLHLLEKELQQLGLPTDLDENGYLFA
    NCTC8325        MKNQLIDRLTRYTTIDTQSDPKSTTTPSTEKQWDLLHLLEKELQQLGLPTDLDENGYLFA
    Newman          MKNQLIDRLTRYTTIDTQSDPKSTTTPSTEKQWDLLHLLEKELQQLGLPTDLDENGYLFA
    USA300_FPR3757  MKNQLIDRLTRYTTIDTQSDPKSTTTPSTEKQWDLLHLLEKELQQLGLPTDLDENGYLFA
                    ************************************************************

    COL             TLESNIDVDVPTVGFLAHVDTSPDFNASNVKPQIIENYDGKPYKLGNTKRVLDPKVFPEL
    N315            TLESNIDADVPTVGFLAHVDTSPDFNASNVKPQIIENYDGKPYKLGNTKRVLDPKVFPEL
    NCTC8325        TLESNIDVDVPTVGFLAHVDTSPDFNASNVKPQIIENYDGKPYKLGNTKRVLDPKVFPEL
    Newman          TLESNIDVDVPTVGFLAHVDTSPDFNASNVKPQIIENYDGKPYKLGNTKRVLDPKVFPEL
    USA300_FPR3757  TLESNIDVDVPTVGFLAHVDTSPDFNASNVKPQIIENYDGKPYKLGNTKRVLDPKVFPEL
                    *******.****************************************************

    COL             NSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFTPDEEIGRGP
    N315            NSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFTPDEEIGRGP
    NCTC8325        NSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFTPDEEIGRGP
    Newman          NSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFTPDEEIGRGP
    USA300_FPR3757  NSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFTPDEEIGRGP
                    ************************************************************

    COL             HKFDVDRFNADFAYTMDGSQYGELQYESFNAAEAVITCHGVNVHPGSAKNAMVNAIRLGE
    N315            HKFDVDRFNADFAYTMDGSQYGELQYESFNAAEAVITCHGVNVHPGSAKNAMVNAIRLGE
    NCTC8325        HKFDVDRFNADFAYTMDGSQYGELQYESFNAAEAVITCHGVNVHPGSAKNAMVNAIRLGE
    Newman          HKFDVDRFNADFAYTMDGSQYGELQYESFNAAEAVITCHGVNVHPGSAKNAMVNAIRLGE
    USA300_FPR3757  HKFDVDRFNADFAYTMDGSQYGELQYESFNAAEAVITCHGVNVHPGSAKNAMVNAIRLGE
                    ************************************************************

    COL             QFDSLLPDSEVPERTEGYEGFYHLMNFEGTVEKATLQYIIRDHDKKQFELRKKRILEIRD
    N315            QFDSLLPDSEVPERTEGYEGFYHLMNFEGTVEKATLQYIIRDHDKKQFELRKKRILEIRD
    NCTC8325        QFDSLLPDSEVPERTEGYEGFYHLMNFEGTVEKATLQYIIRDHDKKQFELRKKRILEIRD
    Newman          QFDSLLPDSEVPERTEGYEGFYHLMNFEGTVEKATLQYIIRDHDKKQFELRKKRILEIRD
    USA300_FPR3757  QFDSLLPDSEVPERTEGYEGFYHLMNFEGTVEKATLQYIIRDHDKKQFELRKKRILEIRD
                    ************************************************************

    COL             DINAHFENYPVKVDISDQYFNMAEKILPLPHIIDIPKRVFAKLDIPANTEPIRGGTDGSQ
    N315            DINAHFENYPVKVDISDQYFNMAEKILPLPHIIDIPKRVFAKLDIPANTEPIRGGTDGSQ
    NCTC8325        DINAHFENYPVKVDISDQYFNMAEKILPLPHIIDIPKRVFAKLDIPANTEPIRGGTDGSQ
    Newman          DINAHFENYPVKVDISDQYFNMAEKILPLPHIIDIPKRVFAKLDIPANTEPIRGGTDGSQ
    USA300_FPR3757  DINAHFENYPVKVDISDQYFNMAEKILPLPHIIDIPKRVFAKLDIPANTEPIRGGTDGSQ
                    ************************************************************

    COL             LSFMGLPTPNIFTGCGNFHGPYEYASIDVMEKAVQVIIGIVEDIAENH
    N315            LSFMGLPTPNIFTGCGNFHGPYEYASIDVMEKAVQVIIGIVEDIAENH
    NCTC8325        LSFMGLPTPNIFTGCGNFHGPYEYASIDVMEKAVQVIIGIVEDIAENH
    Newman          LSFMGLPTPNIFTGCGNFHGPYEYASIDVMEKAVQVIIGIVEDIAENH
    USA300_FPR3757  LSFMGLPTPNIFTGCGNFHGPYEYASIDVMEKAVQVIIGIVEDIAENH
                    ************************************************