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Summary[edit source | edit]

  • pan ID?: SAUPAN003107000
  • symbol?: cdr
  • description?: coenzyme A disulfide reductase

      descriptions from strain specific annotations:

    • coenzyme A disulfide reductase
    • CoA-disulfide reductase
  • strand?: -
  • coordinates?: 3492785..3494101
  • synteny block?: BlockID0022000
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    SA0831 (cdr)
    NCTC8325:
    Newman:
    NWMN_0841 (cdr)
    USA300_FPR3757:
    04-02981:
    SA2981_0925 (cdr)
    08BA02176:
    C248_0996
    11819-97:
    MS7_0926 (cdr)
    71193:
    ST398NM01_0970
    ECT-R 2:
    ECTR2_826 (cdr)
    ED133:
    SAOV_0917c
    ED98:
    SAAV_0931
    HO 5096 0412:
    SAEMRSA15_08000
    JH1:
    SaurJH1_0989
    JH9:
    SaurJH9_0970
    JKD6008:
    SAA6008_00923
    JKD6159:
    SAA6159_00830
    LGA251:
    SARLGA251_08880
    M013:
    M013TW_0889
    MRSA252:
    SAR0933
    MSHR1132:
    SAMSHR1132_08220
    MSSA476:
    SAS0840
    Mu3:
    SAHV_0965 (cdr)
    Mu50:
    SAV0970 (cdr)
    MW2:
    MW0852 (cdr)
    RF122:
    SAB0839c
    ST398:
    SAPIG0970 (cdr)
    T0131:
    SAT0131_01003
    TCH60:
    HMPREF0772_12275 (cdr)
    TW20:
    SATW20_09700
    USA300_TCH1516:
    USA300HOU_0929 (cdr)
    VC40:
    SAVC_04025

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYAL
    N315            MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYAL
    NCTC8325        MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYAL
    Newman          MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYAL
    USA300_FPR3757  MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYAL
                    ********************************************************:***

    COL             AYTPEEFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL
    N315            AYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSL
    NCTC8325        AYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL
    Newman          AYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL
    USA300_FPR3757  AYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL
                    *****:*************************:****************************

    COL             GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS
    N315            GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVIGAGYVSLEVLENLYERGLHPTLIHRS
    NCTC8325        GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS
    Newman          GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS
    USA300_FPR3757  GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRS
                    *********************************:**************************

    COL             DKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH
    N315            DKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEITFKSGKVEHYDMIIEGVGTH
    NCTC8325        DKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH
    Newman          DKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH
    USA300_FPR3757  DKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH
                    ********************************:***************************

    COL             PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
    N315            PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
    NCTC8325        PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
    Newman          PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
    USA300_FPR3757  PNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHR
                    ************************************************************

    COL             AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
    N315            AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
    NCTC8325        AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
    Newman          AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
    USA300_FPR3757  AASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHAN
                    ************************************************************

    COL             YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
    N315            YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
    NCTC8325        YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
    Newman          YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
    USA300_FPR3757  YYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYA
                    ************************************************************

    COL             PPYSHPKDLINMIGYKAK
    N315            PPYSHPKDLINMIGYKAK
    NCTC8325        PPYSHPKDLINMIGYKAK
    Newman          PPYSHPKDLINMIGYKAK
    USA300_FPR3757  PPYSHPKDLINMIGYKAK
                    ******************