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Summary[edit source | edit]

  • pan ID?: SAUPAN003248000
  • symbol?: menB
  • description?: 1,4-dihydroxy-2-naphthoyl-CoA synthase

      descriptions from strain specific annotations:

    • 1,4-dihydroxy-2-naphthoyl-CoA synthase
    • naphthoate synthase
    • dihydroxynaphthoic acid synthetase
    • putative naphthoate synthase
  • strand?: +
  • coordinates?: 3624092..3624913
  • synteny block?: BlockID0023320
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1054 (menB)
    N315:
    SA0898 (menB)
    NCTC8325:
    Newman:
    NWMN_0915 (memB)
    USA300_FPR3757:
    04-02981:
    SA2981_1000 (menB)
    08BA02176:
    C248_1070 (menB)
    11819-97:
    MS7_1003 (menB)
    71193:
    ST398NM01_1043
    ECT-R 2:
    ECTR2_901 (menB)
    ED133:
    SAOV_0991
    ED98:
    SAAV_1009 (menB)
    HO 5096 0412:
    SAEMRSA15_08770 (menB)
    JH1:
    SaurJH1_1127
    JH9:
    SaurJH9_1104
    JKD6008:
    SAA6008_01000 (menB)
    JKD6159:
    SAA6159_00902 (menB)
    LGA251:
    SARLGA251_09600 (menB)
    M013:
    M013TW_0975
    MRSA252:
    SAR1019 (menB)
    MSHR1132:
    SAMSHR1132_08940
    MSSA476:
    SAS0981
    Mu3:
    SAHV_1038 (menB)
    Mu50:
    SAV1045 (menB)
    MW2:
    MW0929 (menB)
    RF122:
    SAB0912 (menB)
    ST398:
    SAPIG1043 (menB)
    T0131:
    SAT0131_01080 (mtlD)
    TCH60:
    HMPREF0772_12189 (menB)
    TW20:
    SATW20_10420 (menB)
    USA300_TCH1516:
    USA300HOU_0993 (menB)
    VC40:
    SAVC_04395

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTNRQWETLREYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSV
    N315            MTNRQWETLREYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSV
    NCTC8325        MTNRQWETLREYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSV
    Newman          MTNRQWETLREYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSV
    USA300_FPR3757  MTNRQWETLREYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSV
                    ************************************************************

    COL             IVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVG
    N315            IVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVG
    NCTC8325        IVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVG
    Newman          IVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVG
    USA300_FPR3757  IVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVG
                    ************************************************************

    COL             GGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNA
    N315            GGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNA
    NCTC8325        GGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNA
    Newman          GGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNA
    USA300_FPR3757  GGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNA
                    ************************************************************

    COL             QEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGD
    N315            QEALDMGLVNTVVPLDKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGD
    NCTC8325        QEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGD
    Newman          QEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGD
    USA300_FPR3757  QEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGD
                    ***************:********************************************

    COL             ATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP
    N315            ATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP
    NCTC8325        ATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP
    Newman          ATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP
    USA300_FPR3757  ATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP
                    *********************************