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Summary[edit source | edit]

  • pan ID?: SAUPAN003353000
  • symbol?:
  • description?: nucleotidyltransferase
  • strand?: -
  • coordinates?: 3718793..3719932
  • synteny block?: BlockID0024370
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1082
    08BA02176:
    C248_1152
    11819-97:
    MS7_1082
    71193:
    ST398NM01_1122
    ECT-R 2:
    ECTR2_980
    ED133:
    SAOV_1067c
    ED98:
    SAAV_1092
    HO 5096 0412:
    SAEMRSA15_09550
    JH1:
    SaurJH1_1207
    JH9:
    SaurJH9_1185
    JKD6008:
    SAA6008_01080
    JKD6159:
    SAA6159_00980
    LGA251:
    SARLGA251_10380
    M013:
    M013TW_1057
    MRSA252:
    SAR1099
    MSHR1132:
    SAMSHR1132_09720
    MSSA476:
    SAS1060
    Mu3:
    SAHV_1117
    Mu50:
    SAV1126
    MW2:
    MW1008
    RF122:
    SAB0990c
    ST398:
    SAPIG1122
    T0131:
    SAT0131_01164
    TCH60:
    HMPREF0772_12107
    TW20:
    SATW20_11200
    USA300_TCH1516:
    USA300HOU_1063
    VC40:
    SAVC_04790

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMAL
    N315            MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMAL
    NCTC8325        MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMAL
    Newman          MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMAL
    USA300_FPR3757  MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMAL
                    ************************************************************

    COL             STADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIE
    N315            STADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIE
    NCTC8325        STADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIE
    Newman          STADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIE
    USA300_FPR3757  STADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIE
                    ************************************************************

    COL             QSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISYLKAIAKNAKNINAISIKREN
    N315            QSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISYLKAIAKNAKNINAISIKREN
    NCTC8325        QSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISYLKAIAKNAKNINAISIKREN
    Newman          QSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISYLKAIAKNAKNINAISIKREN
    USA300_FPR3757  QSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISYLKAIAKNAKNINAISIKREN
                    ************************************************************

    COL             AQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI
    N315            AQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI
    NCTC8325        AQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI
    Newman          AQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI
    USA300_FPR3757  AQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI
                    ************************************************************

    COL             IAMTTDSLKNIYTVTEGFENRLKSNIYEATDFHHFVKLLKTKRYTYTHIQRLLMNVLLNI
    N315            IAMTTDSLKNIYTVTEGFENRLKSNIYEATDFHHFVKLLKTKRYTYTHIQRLLMNVLLNI
    NCTC8325        IAMTTDSLKNIYTVTEGFENRLKSNIYEATDFHHFVKLLKTKRYTYTHIQRLLMNVLLNI
    Newman          IAMTTDSLKNIYTVTEGFENRLKSNIYEATDFHHFVKLLKTKRYTYTHIQRLLMNVLLNI
    USA300_FPR3757  IAMTTDSLKNIYTVTEGFENRLKSNIYEATDFHHFVKLLKTKRYTYTHIQRLLMNVLLNI
                    ************************************************************

    COL             KPTDVTSNIHAVKVLAMNDRGRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYN
    N315            KPTDVTSNIHAVKVLAMNDRGRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYN
    NCTC8325        KPTDVTSNIHAVKVLAMNDRGRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYN
    Newman          KPTDVTSNIHAVKVLAMNDRGRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYN
    USA300_FPR3757  KPTDVTSNIHAVKVLAMNDRGRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYN
                    ************************************************************

    COL             AISGQQQTDFNTPVIQQYR
    N315            AISGQQQTDFNTPVIQQYR
    NCTC8325        AISGQQQTDFNTPVIQQYR
    Newman          AISGQQQTDFNTPVIQQYR
    USA300_FPR3757  AISGQQQTDFNTPVIQQYR
                    *******************