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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003482000
- symbol?: carA
- synonym:
- description?: carbamoyl phosphate synthase small subunit
- carbamoyl phosphate synthase small subunit
- carbamoyl-phosphate synthase small chain
- carbamoyl-phosphate synthase, small subunit PyrAA
- putative carbamoyl-phosphate synthase,pyrimidine-specific, small chain
- carbamoyl-phosphate synthase, small subunit
- carbamoyl-phosphate synthase pyrimidine-specific small chain (Carbamoyl-phosphate synthetase glutamine chain)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3821722..3822858
- synteny block?: BlockID0025610
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1160 (pyrAA)
08BA02176:
C248_1231 (pyrAA)
11819-97:
MS7_1159 (carA)
6850:
RSAU_001085 (pyrAA)
71193:
ST398NM01_1199
ECT-R 2:
ECTR2_1057 (carA)
ED133:
SAOV_1205
ED98:
SAAV_1173 (carA)
HO 5096 0412:
SAEMRSA15_10350 (pyrAA)
JH1:
SaurJH1_1286
JH9:
SaurJH9_1261
JKD6008:
SAA6008_01156 (pyrAA)
JKD6159:
SAA6159_01055 (pyrAA)
LGA251:
SARLGA251_11130 (pyrAA)
M013:
M013TW_1137
MRSA252:
SAR1178 (pyrAA)
MSHR1132:
SAMSHR1132_10430
MSSA476:
SAS1136
Mu3:
SAHV_1192 (pyrAA)
Mu50:
SAV1202 (pyrAA)
MW2:
MW1085 (pyrAA)
RF122:
SAB1066 (pyrAA)
ST398:
SAPIG1199 (carA)
T0131:
SAT0131_01250
TCH60:
HMPREF0772_12030 (carA)
TW20:
SATW20_11960 (pyrAA)
USA300_TCH1516:
USA300HOU_1140 (carA)
VC40:
SAVC_05175
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQSKRYLVLEDGSFYEGYRLGSDNLTVGEIVFNTAMTGYQETISDPSYTGQIITFTYPLI
N315 MQSKRYLVLEDGSFYEGYRLGSDNLTVGEIVFNTAMTGYQETISDPSYTGQIITFTYPLI
NCTC8325 MQSKRYLVLEDGSFYEGYRLGSDNLTVGEIVFNTAMTGYQETISDPSYTGQIITFTYPLI
Newman MQSKRYLVLEDGSFYEGYRLGSDNLTVGEIVFNTAMTGYQETISDPSYTGQIITFTYPLI
USA300_FPR3757 MQSKRYLVLEDGSFYEGYRLGSDNLTVGEIVFNTAMTGYQETISDPSYTGQIITFTYPLI
************************************************************
COL GNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITR
N315 GNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITR
NCTC8325 GNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITR
Newman GNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITR
USA300_FPR3757 GNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITR
************************************************************
COL KIRQHGVLKAGFTDRKEDIDQLVKHLQQVELPKNEVEIVSTKTPYVSTGKDLSVVLVDFG
N315 KIRQHGVLKAGFTDRKEDIDQLVKHLQQVELPKNEVEIVSTKTPYVSTGKDLSVVLVDFG
NCTC8325 KIRQHGVLKAGFTDRKEDIDQLVKHLQQVELPKNEVEIVSTKTPYVSTGKDLSVVLVDFG
Newman KIRQHGVLKAGFTDRKEDIDQLVKHLQQVELPKNEVEIVSTKTPYVSTGKDLSVVLVDFG
USA300_FPR3757 KIRQHGVLKAGFTDRKEDIDQLVKHLQQVELPKNEVEIVSTKTPYVSTGKDLSVVLVDFG
************************************************************
COL KKQNIVRELNVRGCNVTVVPYTTTAEEILAMAPDGVMLSNGPGNPEVVECAIPMIQGILG
N315 KKQNIVRELNVRGCNVTVVPYTTTAEEILAMAPDGVMLSNGPGNPEVVECAIPMIQGILG
NCTC8325 KKQNIVRELNVRGCNVTVVPYTTTAEEILAMAPDGVMLSNGPGNPEVVECAIPMIQGILG
Newman KKQNIVRELNVRGCNVTVVPYTTTAEEILAMAPDGVMLSNGPGNPEVVECAIPMIQGILG
USA300_FPR3757 KKQNIVRELNVRGCNVTVVPYTTTAEEILAMAPDGVMLSNGPGNPEVVECAIPMIQGILG
************************************************************
COL KIPFFGICLGHQLFALSQGASSFKMKFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSL
N315 KIPFFGICLGHQLFALSQGASSFKMKFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSL
NCTC8325 KIPFFGICLGHQLFALSQGASSFKMKFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSL
Newman KIPFFGICLGHQLFALSQGASSFKMKFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSL
USA300_FPR3757 KIPFFGICLGHQLFALSQGASSFKMKFGHRGANHPVKNLETGKVDITSQNHGYAIDIDSL
************************************************************
COL KSTDLEVTHLALNDGTVEGLKHKTLPAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK
N315 KSTDLEVTHLALNDGTVEGLKHKTLPAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK
NCTC8325 KSTDLEVTHLALNDGTVEGLKHKTLPAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK
Newman KSTDLEVTHLALNDGTVEGLKHKTLPAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK
USA300_FPR3757 KSTDLEVTHLALNDGTVEGLKHKTLPAFSVQYHPEANPGPSDSNYLFDDFVAMMTNFKEK
************************************************************
COL ERHINA
N315 ERHINA
NCTC8325 ERHINA
Newman ERHINA
USA300_FPR3757 ERHINA
******