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Summary[edit source | edit]

  • pan ID?: SAUPAN003563000
  • symbol?: rasP
  • description?: zinc metalloprotease yluc

      descriptions from strain specific annotations:

    • zinc metalloprotease yluc
    • membrane-associated zinc metalloprotease
    • membrane-associated zinc metalloprotease, putative
    • RIP metalloprotease RseP
    • Membrane endopeptidase, M50 family
    • putative membrane-associated zinc metalloprotease
    • M50 family peptidase
    • Putative zinc metalloprotease
  • strand?: +
  • coordinates?: 3896458..3897744
  • synteny block?: BlockID0026400
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1220
    08BA02176:
    C248_1295
    11819-97:
    MS7_1220 (rseP)
    71193:
    ST398NM01_1264
    ECT-R 2:
    ECTR2_1118 (rseP)
    ED133:
    SAOV_1264
    ED98:
    SAAV_1237
    HO 5096 0412:
    SAEMRSA15_10950
    JH1:
    SaurJH1_1348
    JH9:
    SaurJH9_1322
    JKD6008:
    SAA6008_01217
    JKD6159:
    SAA6159_01117
    LGA251:
    SARLGA251_11730
    M013:
    M013TW_1202
    MRSA252:
    SAR1238
    MSHR1132:
    SAMSHR1132_11050
    MSSA476:
    SAS1196
    Mu3:
    SAHV_1252
    Mu50:
    SAV1262
    MW2:
    MW1145
    RF122:
    SAB1124
    ST398:
    SAPIG1264 (rseP)
    T0131:
    SAT0131_01315
    TCH60:
    HMPREF0772_11967 (rseP)
    TW20:
    SATW20_12560
    USA300_TCH1516:
    USA300HOU_1194
    VC40:
    SAVC_05475

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIR
    N315            MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIR
    NCTC8325        ----------------------------------MCPEFAIGMGPKIFSFRKNETLYTIR
    Newman          MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIR
    USA300_FPR3757  ----------------------------------MCPEFAIGMGPKIFSFRKNETLYTIR
                                                      **************************

    COL             LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
    N315            LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
    NCTC8325        LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
    Newman          LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
    USA300_FPR3757  LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
                    ************************************************************

    COL             KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
    N315            KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
    NCTC8325        KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
    Newman          KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
    USA300_FPR3757  KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
                    ************************************************************

    COL             FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
    N315            FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
    NCTC8325        FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
    Newman          FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
    USA300_FPR3757  FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
                    ************************************************************

    COL             ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIV
    N315            ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIV
    NCTC8325        ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIV
    Newman          ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIV
    USA300_FPR3757  ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIV
                    *******************************:****************************

    COL             FGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
    N315            YGFESFLKGSTLIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
    NCTC8325        FGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
    Newman          FGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
    USA300_FPR3757  FGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
                    :**:*** *** ************************************************

    COL             LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
    N315            LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
    NCTC8325        LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
    Newman          LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
    USA300_FPR3757  LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
                    ************************************************************

    COL             NDIRRYFL
    N315            NDIRRYFL
    NCTC8325        NDIRRYFL
    Newman          NDIRRYFL
    USA300_FPR3757  NDIRRYFL
                    ********