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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003563000
- symbol?: rasP
- synonym:
- description?: RIP metalloprotease RseP
- RIP metalloprotease RseP
- membrane-associated zinc metalloprotease
- membrane-associated zinc metalloprotease, putative
- putative membrane-associated zinc metalloprotease
- M50 family peptidase
- Membrane endopeptidase, M50 family
- Putative zinc metalloprotease
- zinc metalloprotease yluc
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3896458..3897744
- synteny block?: BlockID0026400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1220
08BA02176:
C248_1295
11819-97:
MS7_1220 (rseP)
6850:
RSAU_001144
71193:
ST398NM01_1264
ECT-R 2:
ECTR2_1118 (rseP)
ED133:
SAOV_1264
ED98:
SAAV_1237
HO 5096 0412:
SAEMRSA15_10950
JH1:
SaurJH1_1348
JH9:
SaurJH9_1322
JKD6008:
SAA6008_01217
JKD6159:
SAA6159_01117
LGA251:
SARLGA251_11730
M013:
M013TW_1202
MRSA252:
SAR1238
MSHR1132:
SAMSHR1132_11050
MSSA476:
SAS1196
Mu3:
SAHV_1252
Mu50:
SAV1262
MW2:
MW1145
RF122:
SAB1124
ST398:
SAPIG1264 (rseP)
T0131:
SAT0131_01315
TCH60:
HMPREF0772_11967 (rseP)
TW20:
SATW20_12560
USA300_TCH1516:
USA300HOU_1194
VC40:
SAVC_05475
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIR
N315 MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIR
NCTC8325 ----------------------------------MCPEFAIGMGPKIFSFRKNETLYTIR
Newman MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIR
USA300_FPR3757 ----------------------------------MCPEFAIGMGPKIFSFRKNETLYTIR
**************************
COL LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
N315 LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
NCTC8325 LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
Newman LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
USA300_FPR3757 LLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDF
************************************************************
COL KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
N315 KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
NCTC8325 KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
Newman KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
USA300_FPR3757 KDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRDRQFAHKKPWPKFLTLFAGPL
************************************************************
COL FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
N315 FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
NCTC8325 FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
Newman FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
USA300_FPR3757 FNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
************************************************************
COL ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIV
N315 ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIV
NCTC8325 ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIV
Newman ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIV
USA300_FPR3757 ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIV
*******************************:****************************
COL FGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
N315 YGFESFLKGSTLIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
NCTC8325 FGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
Newman FGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
USA300_FPR3757 FGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTA
:**:*** *** ************************************************
COL LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
N315 LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
NCTC8325 LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
Newman LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
USA300_FPR3757 LLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAETTIIAIGAIFMVVIMILVTW
************************************************************
COL NDIRRYFL
N315 NDIRRYFL
NCTC8325 NDIRRYFL
Newman NDIRRYFL
USA300_FPR3757 NDIRRYFL
********