⊟Summary[edit | edit source]

pan ID^?: SAUPAN004113000
symbol^?: gcvPA
synonym:
description^?: glycine dehydrogenase subunit 1
- glycine dehydrogenase subunit 1
- glycine dehydrogenase
- aminomethyl-transferring glycine dehydrogenase subunit GcvPA
- glycine cleavage system P protein, subunit 1
- aminotransferase class-V family protein
- glycine cleavage system P-family protein
- glycine dehydrogenase (decarboxylating)
- glycine dehydrogenase (glycine cleavage system P1 protein )
- glycine dehydrogenase, subunit 1 (glycine cleavage system P protein)
- Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein)
- glycine dehydrogenase [decarboxylating] subunit 1
- putative glycine cleavage system P-protein
strand^?: -
coordinates^?: 4389051..4390397
synteny block^?: BlockID0031430
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL1594

N315:

SA1366

NCTC8325:

SAOUHSC_01633

Newman:

NWMN_1440 (gcvPA)

USA300_FPR3757:

SAUSA300_1497

04-02981:

SA2981_1494

08BA02176:

C248_1578

11819-97:

MS7_1553

6850:

RSAU_001402

71193:

ST398NM01_1601

ECT-R 2:

ECTR2_1387

ED133:

SAOV_1536

ED98:

SAAV_1528

HO 5096 0412:

SAEMRSA15_14560

JH1:

SaurJH1_1627

JH9:

SaurJH9_1594

JKD6008:

SAA6008_01505 (gcvPA)

JKD6159:

SAA6159_01471 (gcvPA)

LGA251:

SARLGA251_14420

M013:

M013TW_1551

MRSA252:

SAR1613

MSHR1132:

SAMSHR1132_13760

MSSA476:

SAS1474

Mu3:

SAHV_1523

Mu50:

SAV1536

MW2:

MW1488

RF122:

SAB1408c

ST398:

SAPIG1601

T0131:

SAT0131_01629

TCH60:

HMPREF0772_11605 (gcvP)

TW20:

SATW20_15320

USA300_TCH1516:

USA300HOU_1537 (gcvPA)

VC40:

SAVC_06925

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             ---MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
N315            ---MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
NCTC8325        ---MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
Newman          MCIVSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
USA300_FPR3757  ---MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
                   :********************************************************

COL             NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
N315            NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
NCTC8325        NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
Newman          NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
USA300_FPR3757  NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
                ************************************************************

COL             FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
N315            FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
NCTC8325        FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
Newman          FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
USA300_FPR3757  FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
                ************************************************************

COL             TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLKKIHSFIEDKKAL
N315            TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLEKIQSFIEDKKAL
NCTC8325        TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLEKIHSFIEDKKAL
Newman          TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLEKIHSFIEDKKAL
USA300_FPR3757  TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLEKIHSFIEDKKAL
                ***********************************************:**:*********

COL             FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
N315            FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
NCTC8325        FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
Newman          FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
USA300_FPR3757  FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
                ************************************************************

COL             GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
N315            GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
NCTC8325        GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
Newman          GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
USA300_FPR3757  GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
                ************************************************************

COL             QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
N315            QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
NCTC8325        QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
Newman          QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
USA300_FPR3757  QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
                ************************************************************

COL             DFKNHMLIAVTELRTKDEIDTFVEKAGELND
N315            DFKNHMLIAVTELRTKDEIDTFVEKAGELND
NCTC8325        DFKNHMLIAVTELRTKDEIDTFVEKAGELND
Newman          DFKNHMLIAVTELRTKDEIDTFVEKAGELND
USA300_FPR3757  DFKNHMLIAVTELRTKDEIDTFVEKAGELND
                *******************************

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Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]